RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 KLKB1P03952 638 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 CLEC3BP05452 202 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 SPARCP09486 303 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 MYZAPP0CAP1 466 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 PSG1P11464 419 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 ENO3P13929 434 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 PTPN2P17706 415 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 HMGB2P26583 209 aaKnown RBP5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 DCTDP32321 178 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 CPOXP36551 454 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 THPOP40225 353 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 POLD2P49005 469 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 P2RX3P56373 397 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 ERV3-1Q14264 604 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 LPIN1Q14693 890 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 PPP2R5BQ15173 497 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 RNPS1Q15287 305 aaKnown RBP5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 PRAMEF19Q5SWL8 479 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 ATG9BQ674R7 924 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 TMED8Q6PL24 325 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 TRAPPC11Q7Z392 1133 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 ZMIZ2Q8NF64 920 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 GJC3Q8NFK1 279 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 ADAMTS15Q8TE58 950 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 ARHGAP45Q92619 1136 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 ZC3HAV1LQ96H79 300 aaKnown RBP5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 APOLD1Q96LR9 279 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 BBS4Q96RK4 519 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 CHCHD6Q9BRQ6 235 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 TMEM79Q9BSE2 394 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 TEX13AQ9BXU3 409 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 BLOC1S4Q9NUP1 217 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 RNF7Q9UBF6 113 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 NDRG3Q9UGV2 375 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 A4GNTQ9UNA3 340 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 TNS1Q9HBL0 1735 aaKnown RBP5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 RGS12O14924 1447 aa5.15□□□□□ -1.58
HMGB3P19-201ENST00000403971 EP400Q96L91 3159 aa5.15□□□□□ -1.58
HMGB3P19-201ENST00000403971 CACNA1IQ9P0X4 2223 aa5.15□□□□□ -1.58
HMGB3P19-201ENST00000403971 ANKRD36CQ5JPF3 1778 aa5.15□□□□□ -1.58
HMGB3P19-201ENST00000403971 GAGE12JA6NER3 117 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 NPIPB11E5RHQ5 1161 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 IPO8O15397 1037 aaKnown RBP5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 LDB2O43679 373 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 SYF2O95926 243 aaKnown RBP5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 MMP3P08254 477 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 TFPIP10646 304 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 ZNF8P17098 575 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 MAPK4P31152 587 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 PTGER1P34995 402 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 RFX5P48382 616 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 GNAQP50148 359 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 PMS2P54278 862 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 EIF3BP55884 814 aaKnown RBP5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 RRP1P56182 461 aaKnown RBP5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 HDAC4P56524 1084 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 TMEM115Q12893 351 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 TRAF1Q13077 416 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 SLC39A6Q13433 755 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 DCAF12L2Q5VW00 463 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 ZNF425Q6IV72 752 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 CDC73Q6P1J9 531 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 IRF2BP2Q7Z5L9 587 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 DENND6AQ8IWF6 608 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 RBFAQ8N0V3 343 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 C7orf57Q8NEG2 295 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 GABPB2Q8TAK5 448 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 ETNPPLQ8TBG4 499 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 SLC35F5Q8WV83 523 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 LPAR1Q92633 364 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 MSTO1Q9BUK6 570 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 CDT1Q9H211 546 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 KRT84Q9NSB2 600 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 POT1Q9NUX5 634 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 INTS6Q9UL03 887 aaKnown RBP5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 CARD8Q9Y2G2 431 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 PSAT1Q9Y617 370 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 SCINQ9Y6U3 715 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 AFDNP55196 1824 aaKnown RBP5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 PTPRCP08575 1304 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 ITIH6Q6UXX5 1313 aa5.15□□□□□ -1.59
HMGB3P19-201ENST00000403971 NUP188Q5SRE5 1749 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 ARFGEF2Q9Y6D5 1785 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 UBR3Q6ZT12 1888 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 BECN2A8MW95 431 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 LIASO43766 372 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 RGS11O94810 467 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 TMEM191BP0C7N4 346 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 HSPA1AP0DMV8 641 aaKnown RBP5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 HSPA1BP0DMV9 641 aaKnown RBP5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 HOXB2P14652 356 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 ITGAXP20702 1163 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 CHMP24386 653 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 PBX3P40426 434 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 ARL1P40616 181 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 NR4A2P43354 598 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 FAM27E3Q08E93 113 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 GPR18Q14330 331 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 KRT24Q2M2I5 525 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 SOWAHAQ2M3V2 549 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms