RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 NYNRINQ9P2P1 1898 aaKnown RBP19.84■□□□□ 0.77
CCDC47-202ENST00000403162 AKAP10O43572 662 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 GRIA3P42263 894 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 EIF4EBP2Q13542 120 aaPredicted RBP19.84■□□□□ 0.77
CCDC47-202ENST00000403162 TIGD7Q6NT04 549 aaPredicted RBP19.84■□□□□ 0.77
CCDC47-202ENST00000403162 SCML4Q8N228 414 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 SNX31Q8N9S9 440 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 GOLM1Q8NBJ4 401 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 SCLYQ96I15 445 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 ZFP42Q96MM3 310 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 ARNT2Q9HBZ2 717 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 RBM22Q9NW64 420 aaKnown RBP eCLIP19.84■□□□□ 0.773e-6■■■■□ 21.1
CCDC47-202ENST00000403162 ABCD2Q9UBJ2 740 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 AQP12BA6NM10 295 aa19.83■□□□□ 0.77
CCDC47-202ENST00000403162 WISP3O95389 354 aaPredicted RBP19.83■□□□□ 0.77
CCDC47-202ENST00000403162 SLC26A3P40879 764 aa19.83■□□□□ 0.77
CCDC47-202ENST00000403162 MANEALQ5VSG8 457 aa19.83■□□□□ 0.77
CCDC47-202ENST00000403162 CLEC6AQ6EIG7 209 aa19.83■□□□□ 0.77
CCDC47-202ENST00000403162 PRMT9Q6P2P2 845 aa19.83■□□□□ 0.77
CCDC47-202ENST00000403162 AQP12AQ8IXF9 295 aa19.83■□□□□ 0.77
CCDC47-202ENST00000403162 ADAMTS16Q8TE57 1224 aa19.83■□□□□ 0.77
CCDC47-202ENST00000403162 C19orf60Q96EN9 201 aa19.83■□□□□ 0.77
CCDC47-202ENST00000403162 HOPXQ9BPY8 73 aaPredicted RBP19.83■□□□□ 0.77
CCDC47-202ENST00000403162 TRIM15Q9C019 465 aa19.83■□□□□ 0.77
CCDC47-202ENST00000403162 SIK2Q9H0K1 926 aa19.83■□□□□ 0.77
CCDC47-202ENST00000403162 CATSPERBQ9H7T0 1116 aa19.83■□□□□ 0.77
CCDC47-202ENST00000403162 A0A087WXM4 84 aa19.83■□□□□ 0.76
CCDC47-202ENST00000403162 ZNF701M0R085 212 aaPredicted RBP19.83■□□□□ 0.76
CCDC47-202ENST00000403162 CLTBP09497 229 aa19.83■□□□□ 0.76
CCDC47-202ENST00000403162 ALDOCP09972 364 aaKnown RBP19.83■□□□□ 0.76
CCDC47-202ENST00000403162 MYF6P23409 242 aa19.83■□□□□ 0.76
CCDC47-202ENST00000403162 ATP6V0D1P61421 351 aa19.83■□□□□ 0.76
CCDC47-202ENST00000403162 NFKB2Q00653 900 aa19.83■□□□□ 0.76
CCDC47-202ENST00000403162 GPNMBQ14956 572 aa19.83■□□□□ 0.76
CCDC47-202ENST00000403162 ZNF678Q5SXM1 525 aa19.83■□□□□ 0.76
CCDC47-202ENST00000403162 HECTD2Q5U5R9 776 aa19.83■□□□□ 0.76
CCDC47-202ENST00000403162 RETREG3Q86VR2 466 aa19.83■□□□□ 0.76
CCDC47-202ENST00000403162 CAMK1DQ8IU85 385 aa19.83■□□□□ 0.76
CCDC47-202ENST00000403162 TNIP2Q8NFZ5 429 aa19.83■□□□□ 0.76
CCDC47-202ENST00000403162 ANKRD49Q8WVL7 239 aa19.83■□□□□ 0.76
CCDC47-202ENST00000403162 SLC39A3Q9BRY0 314 aa19.83■□□□□ 0.76
CCDC47-202ENST00000403162 ATXN3LQ9H3M9 355 aa19.83■□□□□ 0.76
CCDC47-202ENST00000403162 TBX21Q9UL17 535 aa19.83■□□□□ 0.76
CCDC47-202ENST00000403162 DLGAP1O14490 977 aa19.82■□□□□ 0.76
CCDC47-202ENST00000403162 NME5P56597 212 aa19.82■□□□□ 0.76
CCDC47-202ENST00000403162 NUP107P57740 925 aa19.82■□□□□ 0.76
CCDC47-202ENST00000403162 UGT3A2Q3SY77 523 aa19.82■□□□□ 0.76
CCDC47-202ENST00000403162 BRMS1LQ5PSV4 323 aa19.82■□□□□ 0.76
CCDC47-202ENST00000403162 BEND5Q7L4P6 421 aa19.82■□□□□ 0.76
CCDC47-202ENST00000403162 LPPQ93052 612 aa19.82■□□□□ 0.76
CCDC47-202ENST00000403162 ITFG2Q969R8 447 aa19.82■□□□□ 0.76
CCDC47-202ENST00000403162 PPP1R14BQ96C90 147 aa19.82■□□□□ 0.76
CCDC47-202ENST00000403162 TRIM62Q9BVG3 475 aa19.82■□□□□ 0.76
CCDC47-202ENST00000403162 FBRSL1Q9HCM7 1045 aaKnown RBP19.82■□□□□ 0.76
CCDC47-202ENST00000403162 SLC38A7Q9NVC3 462 aa19.82■□□□□ 0.76
CCDC47-202ENST00000403162 DNAAF2Q9NVR5 837 aaKnown RBP19.82■□□□□ 0.76
CCDC47-202ENST00000403162 CACNG4Q9UBN1 327 aa19.82■□□□□ 0.76
CCDC47-202ENST00000403162 TIMM13Q9Y5L4 95 aaPredicted RBP19.82■□□□□ 0.76
CCDC47-202ENST00000403162 MIA3Q5JRA6 1907 aa19.82■□□□□ 0.76
CCDC47-202ENST00000403162 TRIM64A6NGJ6 449 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 NME4O00746 187 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 HSD17B1P14061 328 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 GALK1P51570 392 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 CDH15P55291 814 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 ARTNQ5T4W7 220 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 AFMIDQ63HM1 303 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 KDELC1Q6UW63 502 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 CROCCP3Q8IVE0 287 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 AGPAT4Q9NRZ5 378 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 GMPR2Q9P2T1 348 aaKnown RBP19.81■□□□□ 0.76
CCDC47-202ENST00000403162 VWA7Q9Y334 891 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 NDUFAF1Q9Y375 327 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 hCG_2014768A0A024R1R8 64 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 A0A0U1RQF3 1178 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 MEIS3P2A8K0S8 358 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 IRAK2O43187 625 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 PAPSS2O95340 614 aaPredicted RBP19.81■□□□□ 0.76
CCDC47-202ENST00000403162 WNT3AP56704 352 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 ESRRGP62508 458 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 BNIP2Q12982 314 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 INPP5AQ14642 412 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 ZBED5Q49AG3 693 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 PITRM1Q5JRX3 1037 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 TBCELQ5QJ74 424 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 GPR141Q7Z602 305 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 CILP2Q8IUL8 1156 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 SPNS2Q8IVW8 549 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 CLYBLQ8N0X4 340 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 MINDY1Q8N5J2 469 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 DBF4BQ8NFT6 615 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 SLC45A3Q96JT2 553 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 C3orf30Q96M34 536 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 LIN28AQ9H9Z2 209 aaKnown RBP19.81■□□□□ 0.76
CCDC47-202ENST00000403162 ATP13A1Q9HD20 1204 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 SMOXQ9NWM0 555 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 MAP10Q9P2G4 905 aa19.81■□□□□ 0.76
CCDC47-202ENST00000403162 A0A0J9YYE9 177 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 ATP6AP2A0A1C7CYW4 349 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 DHRS12A0PJE2 317 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 ATP6AP2O75787 350 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms