RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 CEBPBP17676 345 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PAMP19021 973 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PEX2P28328 305 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 EPHA3P29320 983 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 WEE1P30291 646 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 HOXC13P31276 330 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 RING1Q06587 406 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 NSUN2Q08J23 767 aaKnown RBP eCLIP15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 MSLNQ13421 630 aaPredicted RBP15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 MED21Q13503 144 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PPP2R5DQ14738 602 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TRIP4Q15650 581 aaPredicted RBP15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 FOXB2Q5VYV0 432 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 BNC2Q6ZN30 1099 aaPredicted RBP15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ARHGAP12Q8IWW6 846 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ST13P4Q8IZP2 240 aaPredicted RBP15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 DSELQ8IZU8 1212 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 HIPK4Q8NE63 616 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 IPMKQ8NFU5 416 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SPATA22Q8NHS9 363 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 NECTIN4Q96NY8 510 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 FICDQ9BVA6 458 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 KLF16Q9BXK1 252 aaPredicted RBP15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CATSPERBQ9H7T0 1116 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 UBE2ZQ9H832 354 aaPredicted RBP15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ZDHHC2Q9UIJ5 367 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PSMD13Q9UNM6 376 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 XIRP2A4UGR9 3374 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SLC12A8A0AV02 714 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 MATN3O15232 486 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 RNASEH1O60930 286 aaKnown RBP15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 VAPBO95292 243 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 IGLV3-27P01718 113 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CKMP06732 381 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ZCCHC18P0CG32 403 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 MBL2P11226 248 aaPredicted RBP15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CALRP27797 417 aaKnown RBP15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CCR1P32246 355 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 AVPR1AP37288 418 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 GLRBP48167 497 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ARCN1P48444 511 aaKnown RBP15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 OGFRL1Q5TC84 451 aaPredicted RBP15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 DENND5AQ6IQ26 1287 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ZFP1Q6P2D0 407 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 LSMEM2Q8N112 164 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 EFCAB3Q8N7B9 438 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SPDYE1Q8NFV5 336 aaPredicted RBP15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PIP4K2CQ8TBX8 421 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SUSD6Q92537 303 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 FGF13Q92913 245 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ZFRQ96KR1 1074 aaKnown RBP15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ZSWIM3Q96MP5 696 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 GPR78Q96P69 363 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 NUF2Q9BZD4 464 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 MRPL46Q9H2W6 279 aaKnown RBP15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PAPOLBQ9NRJ5 636 aaKnown RBP15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 GDE1Q9NZC3 331 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 XPR1Q9UBH6 696 aa15.96■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CCDC78A2IDD5 438 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 TRPC5OSA6NMA1 111 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 H3BQ06 376 aaPredicted RBP15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 SLC2A3P11169 496 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 VCLP18206 1134 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 ADRA1AP35348 466 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 AQP4P55087 323 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 TBX4P57082 545 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 DNAJB13P59910 316 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 MPP1Q00013 466 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 RFTN1Q14699 578 aaPredicted RBP15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 CBX2Q14781 532 aaPredicted RBP15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 POU6F1Q14863 301 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 SKIV2LQ15477 1246 aaKnown RBP15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 LRRC36Q1X8D7 754 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 TIGD7Q6NT04 549 aaPredicted RBP15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 ARHGAP36Q6ZRI8 547 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 TMEM126BQ8IUX1 230 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 NPAS3Q8IXF0 933 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 PGAM4Q8N0Y7 254 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 PQLC1Q8N2U9 271 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 ZFAND2BQ8WV99 257 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 ING5Q8WYH8 240 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 HLA-CQ95604 372 aa15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 FCRL2Q96LA5 508 aaPredicted RBP15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 DDX50Q9BQ39 737 aaKnown RBP15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 MRPL57Q9BQC6 102 aaKnown RBP15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.96■□□□□ 0.14
CHRFAM7A-203ENST00000401522 EYSQ5T1H1 3165 aa15.95■□□□□ 0.14
CHRFAM7A-203ENST00000401522 KCNU1A8MYU2 1149 aa15.95■□□□□ 0.14
CHRFAM7A-203ENST00000401522 MAFKO60675 156 aa15.95■□□□□ 0.14
CHRFAM7A-203ENST00000401522 KCNA5P22460 613 aa15.95■□□□□ 0.14
CHRFAM7A-203ENST00000401522 CCR10P46092 362 aa15.95■□□□□ 0.14
CHRFAM7A-203ENST00000401522 CD151P48509 253 aa15.95■□□□□ 0.14
CHRFAM7A-203ENST00000401522 PAPOLAP51003 745 aaKnown RBP15.95■□□□□ 0.14
CHRFAM7A-203ENST00000401522 ZXDBP98169 803 aa15.95■□□□□ 0.14
CHRFAM7A-203ENST00000401522 PIGGQ5H8A4 983 aa15.95■□□□□ 0.14
CHRFAM7A-203ENST00000401522 MANEALQ5VSG8 457 aa15.95■□□□□ 0.14
CHRFAM7A-203ENST00000401522 KIAA0930Q6ICG6 404 aaPredicted RBP15.95■□□□□ 0.14
CHRFAM7A-203ENST00000401522 ESRP1Q6NXG1 681 aaKnown RBP15.95■□□□□ 0.14
CHRFAM7A-203ENST00000401522 PIWIL4Q7Z3Z4 852 aaKnown RBP15.95■□□□□ 0.14
CHRFAM7A-203ENST00000401522 DENND6AQ8IWF6 608 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms