RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 NUDT1P36639 197 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ADCY8P40145 1251 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 MPLP40238 635 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PI4KAP42356 2102 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 MAGEA3P43357 314 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SPINT3P49223 89 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 LMAN1P49257 510 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ZNF140P52738 457 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CDK16Q00536 496 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CDH17Q12864 832 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ARHGEF7Q14155 803 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 POU6F1Q14863 301 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ACOX1Q15067 660 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TRADDQ15628 312 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 WDR45BQ5MNZ6 344 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TPRG1LQ5T0D9 272 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 DUPD1Q68J44 220 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 HIBCHQ6NVY1 386 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 LRRC8BQ6P9F7 803 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ASCL5Q7RTU5 278 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 GLT6D1Q7Z4J2 308 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ABI3BPQ7Z7G0 1075 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 LINC00523Q86TU6 105 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CTAGE6Q86UF2 777 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SYT12Q8IV01 421 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CTAGE4Q8IX94 777 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PPIL6Q8IXY8 311 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 RGL4Q8IZJ4 473 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 GPR26Q8NDV2 337 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 MCUQ8NE86 351 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 DENND6BQ8NEG7 585 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CCHCR1Q8TD31 782 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SCAMP4Q969E2 229 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 LRRC45Q96CN5 670 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 NUS1Q96E22 293 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 AGAP2Q99490 1192 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ERP44Q9BS26 406 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 GPR63Q9BZJ6 419 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TRIM31Q9BZY9 425 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ABCG8Q9H221 673 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ARRDC1-AS1Q9H2J1 176 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SEMA4AQ9H3S1 761 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TRABDQ9H4I3 376 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 FSCN3Q9NQT6 498 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 GPR27Q9NS67 375 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 NFKBIL1Q9UBC1 381 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CD84Q9UIB8 345 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SNX24Q9Y343 169 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CACNA1EQ15878 2313 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 WDR87Q6ZQQ6 2873 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 MROH6A6NGR9 719 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 EFCAB8A8MWE9 144 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 GOLGA8MH3BSY2 632 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 AVILO75366 819 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 LMNAP02545 664 aaKnown RBP12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 RETP07949 1114 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TGM1P22735 817 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PSMA3P25788 255 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 MGAT1P26572 445 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 AKT2P31751 481 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CA5AP35218 305 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PFN3P60673 137 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 RACK1P63244 317 aaKnown RBP12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CRADDP78560 199 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SLC7A5Q01650 507 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 DPTQ07507 201 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SGCGQ13326 291 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 LRRC14Q15048 493 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TAF1AQ15573 450 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CCDC38Q502W7 563 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 HENMT1Q5T8I9 393 aaKnown RBP12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TCEAL6Q6IPX3 200 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ESRP1Q6NXG1 681 aaKnown RBP12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 KYAT3Q6YP21 454 aaKnown RBP12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PPP1R21Q6ZMI0 780 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ZNF765Q7L2R6 523 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 MAATS1Q7Z4T9 603 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 RAVER1Q8IY67 606 aaKnown RBP12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SLC22A18ASQ8N1D0 253 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 MPP5Q8N3R9 675 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 DNAAF3Q8N9W5 541 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 MNS1Q8NEH6 495 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 OR13H1Q8NG92 308 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 OR13C4Q8NGS5 318 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 BRSK1Q8TDC3 778 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TCEAL3Q969E4 200 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ZNF778Q96MU6 729 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PWWP2AQ96N64 755 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SERPINB12Q96P63 405 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SRPK1Q96SB4 655 aaKnown RBP12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 HINFPQ9BQA5 517 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 WDR83Q9BRX9 315 aaKnown RBP12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 DPH5Q9H2P9 285 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CAAP1Q9H8G2 361 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CAPN10Q9HC96 672 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 BPIFA1Q9NP55 256 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PARD6AQ9NPB6 346 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 DMGDHQ9UI17 866 aaKnown RBP12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 RAB23Q9ULC3 237 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms