RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 BBIP1A8MTZ0 92 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 GPR182O15218 404 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 LDB2O43679 373 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 MGEA5O60502 916 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 CD1DP15813 335 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 RHOQP17081 205 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 ATP6V1B2P21281 511 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 FDXRP22570 491 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 ANKFN1Q8N957 763 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 PPWD1Q96BP3 646 aaKnown RBP25.57■■□□□ 1.68
COL13A1-203ENST00000398969 SLC39A13Q96H72 371 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 GPATCH1Q9BRR8 931 aaKnown RBP25.57■■□□□ 1.68
COL13A1-203ENST00000398969 UXTQ9UBK9 157 aaPredicted RBP25.57■■□□□ 1.68
COL13A1-203ENST00000398969 TLR6Q9Y2C9 796 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 HTTP42858 3142 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 A0A0J9YYE9 177 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 F8W810 466 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 H3BSA7 217 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 ZNF623O75123 536 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 STAMBPO95630 424 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 SLC4A1P02730 911 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 ATXN1LP0C7T5 689 aaKnown RBP25.57■■□□□ 1.68
COL13A1-203ENST00000398969 USP46P62068 366 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 KIF19Q2TAC6 998 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 DEFB115Q30KQ5 88 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 MAP7D1Q3KQU3 841 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 ALFQ53S48 1182 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 SCN4BQ8IWT1 228 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 PCSK9Q8NBP7 692 aaKnown RBP25.57■■□□□ 1.68
COL13A1-203ENST00000398969 CANT1Q8WVQ1 401 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 PSMG2Q969U7 264 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 LRCH3Q96II8 777 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 CCT7Q99832 543 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 ZYG11BQ9C0D3 744 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 DDX18Q9NVP1 670 aaKnown RBP25.57■■□□□ 1.68
COL13A1-203ENST00000398969 ARMC1Q9NVT9 282 aa25.57■■□□□ 1.68
COL13A1-203ENST00000398969 NR5A2O00482 541 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 HTRA2O43464 458 aaPredicted RBP25.56■■□□□ 1.68
COL13A1-203ENST00000398969 CNTN5O94779 1100 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 TMCC1O94876 653 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 OR4Q2P0C623 313 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 ZNF23P17027 643 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 CKMT2P17540 419 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 GRIA3P42263 894 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 TUSC3Q13454 348 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 ZNF549Q6P9A3 640 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 TEX26Q8N6G2 289 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 PTGR2Q8N8N7 351 aaPredicted RBP25.56■■□□□ 1.68
COL13A1-203ENST00000398969 B4GALNT2Q8NHY0 566 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 ARRDC2Q8TBH0 407 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 EZH1Q92800 747 aaPredicted RBP25.56■■□□□ 1.68
COL13A1-203ENST00000398969 TADA1Q96BN2 335 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 TMEM248Q9NWD8 314 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 MAP10Q9P2G4 905 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 SRRDQ9UH36 339 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 H3BNH8 94 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 PPP6CO00743 305 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 CDK14O94921 469 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 BMP2P12643 396 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 NELFEP18615 380 aaKnown RBP25.56■■□□□ 1.68
COL13A1-203ENST00000398969 CDH2P19022 906 aaPredicted RBP25.56■■□□□ 1.68
COL13A1-203ENST00000398969 SLC5A2P31639 672 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 NME5P56597 212 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 TIAL1Q01085 375 aaKnown RBP eCLIP25.56■■□□□ 1.68
COL13A1-203ENST00000398969 ZBTB49Q6ZSB9 765 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 PGBD5Q8N414 524 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 FAM110BQ8TC76 370 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 SUSD3Q96L08 255 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 TBATAQ96M53 351 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 ZNF512Q96ME7 567 aaPredicted RBP25.56■■□□□ 1.68
COL13A1-203ENST00000398969 PNPLA3Q9NST1 481 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 THEGQ9P2T0 379 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 TMCO1Q9UM00 188 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 PTGDR2Q9Y5Y4 395 aa25.56■■□□□ 1.68
COL13A1-203ENST00000398969 TTC3P53804 2025 aa25.55■■□□□ 1.68
COL13A1-203ENST00000398969 TDRD15B5MCY1 1934 aaKnown RBP25.55■■□□□ 1.68
COL13A1-203ENST00000398969 NME4O00746 187 aa25.55■■□□□ 1.68
COL13A1-203ENST00000398969 FGF4P08620 206 aa25.55■■□□□ 1.68
COL13A1-203ENST00000398969 SLC2A3P11169 496 aa25.55■■□□□ 1.68
COL13A1-203ENST00000398969 PCSK6P29122 969 aa25.55■■□□□ 1.68
COL13A1-203ENST00000398969 MS4A13Q5J8X5 152 aa25.55■■□□□ 1.68
COL13A1-203ENST00000398969 PPP4R4Q6NUP7 873 aa25.55■■□□□ 1.68
COL13A1-203ENST00000398969 ERMP1Q7Z2K6 904 aa25.55■■□□□ 1.68
COL13A1-203ENST00000398969 REM2Q8IYK8 340 aaPredicted RBP25.55■■□□□ 1.68
COL13A1-203ENST00000398969 NUP93Q8N1F7 819 aa25.55■■□□□ 1.68
COL13A1-203ENST00000398969 RYBPQ8N488 228 aaPredicted RBP25.55■■□□□ 1.68
COL13A1-203ENST00000398969 ANKRD60Q9BZ19 345 aa25.55■■□□□ 1.68
COL13A1-203ENST00000398969 OLAHQ9NV23 265 aa25.55■■□□□ 1.68
COL13A1-203ENST00000398969 DUS2Q9NX74 493 aaKnown RBP25.55■■□□□ 1.68
COL13A1-203ENST00000398969 ABCD2Q9UBJ2 740 aa25.55■■□□□ 1.68
COL13A1-203ENST00000398969 GIMAP2Q9UG22 337 aa25.55■■□□□ 1.68
COL13A1-203ENST00000398969 PADI3Q9ULW8 664 aa25.55■■□□□ 1.68
COL13A1-203ENST00000398969 MYRFQ9Y2G1 1151 aa25.55■■□□□ 1.68
COL13A1-203ENST00000398969 LOC285095A0A1B0GVY8 99 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 SIX3O95343 332 aaPredicted RBP25.54■■□□□ 1.68
COL13A1-203ENST00000398969 CD52P31358 61 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 PRKCQQ04759 706 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 NHSL2Q5HYW2 709 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 KRT80Q6KB66 452 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 TRIML2Q8N7C3 387 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms