RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 GPR3P46089 330 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 CCR10P46092 362 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 TSR1Q2NL82 804 aaKnown RBP16.11■□□□□ 0.17
CUX2-202ENST00000397643 NKAIN2Q5VXU1 208 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 WDR59Q6PJI9 974 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 SRLQ86TD4 932 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 CACNA2D3Q8IZS8 1091 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 OR4D9Q8NGE8 314 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 COQ10AQ96MF6 247 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 PSMG3-AS1Q96PY0 264 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 ATP13A3Q9H7F0 1226 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 CARS2Q9HA77 564 aaKnown RBP16.11■□□□□ 0.17
CUX2-202ENST00000397643 TMEM9Q9P0T7 183 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 ANAPC2Q9UJX6 822 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 FZD10Q9ULW2 581 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 MYO6Q9UM54 1294 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 CAPN11Q9UMQ6 739 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 MYO9AB2RTY4 2548 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 IGHV1OR21-1A0A087WYE8 117 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 ZNF891A8MT65 544 aaPredicted RBP16.1■□□□□ 0.17
CUX2-202ENST00000397643 TRAFD1O14545 582 aaPredicted RBP16.1■□□□□ 0.17
CUX2-202ENST00000397643 PPM1DO15297 605 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 CCP110O43303 1012 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 CREB3O43889 395 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 RAD1O60671 282 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 GFPT2O94808 682 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 KRT3P12035 628 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 UNGP13051 313 aaPredicted RBP16.1■□□□□ 0.17
CUX2-202ENST00000397643 JAM2P57087 298 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 SQSTM1Q13501 440 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 NAGSQ8N159 534 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 BMPERQ8N8U9 685 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 AGBL5Q8NDL9 886 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 CPLX3Q8WVH0 158 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 CELF6Q96J87 481 aaKnown RBP16.1■□□□□ 0.17
CUX2-202ENST00000397643 SLC45A3Q96JT2 553 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 CATSPER2Q96P56 530 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 PCDHB18PQ96TA0 734 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 TEX101Q9BY14 249 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 GSDMCQ9BYG8 508 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 FRMD8Q9BZ67 464 aaPredicted RBP16.1■□□□□ 0.17
CUX2-202ENST00000397643 SPRY4Q9C004 299 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 CATSPERBQ9H7T0 1116 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 TRNAU1APQ9NX07 287 aaKnown RBP16.1■□□□□ 0.17
CUX2-202ENST00000397643 OCIAD1Q9NX40 245 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 MOSPD1Q9UJG1 213 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 PILRAQ9UKJ1 303 aa16.1■□□□□ 0.17
CUX2-202ENST00000397643 LUC7L2Q9Y383 392 aaKnown RBP16.1■□□□□ 0.17
CUX2-202ENST00000397643 TCRBV5S1A1TA0A578 114 aa16.09■□□□□ 0.17
CUX2-202ENST00000397643 B4E171 279 aa16.09■□□□□ 0.17
CUX2-202ENST00000397643 FGF10O15520 208 aaPredicted RBP16.09■□□□□ 0.17
CUX2-202ENST00000397643 NKX2-8O15522 239 aa16.09■□□□□ 0.17
CUX2-202ENST00000397643 DUX1O43812 170 aa16.09■□□□□ 0.17
CUX2-202ENST00000397643 GYPCP04921 128 aa16.09■□□□□ 0.17
CUX2-202ENST00000397643 CCDC172P0C7W6 258 aa16.09■□□□□ 0.17
CUX2-202ENST00000397643 MPSTP25325 297 aa16.09■□□□□ 0.17
CUX2-202ENST00000397643 SOX5P35711 763 aa16.09■□□□□ 0.17
CUX2-202ENST00000397643 TSPAN7P41732 249 aa16.09■□□□□ 0.17
CUX2-202ENST00000397643 ZBED6P86452 979 aa16.09■□□□□ 0.17
CUX2-202ENST00000397643 ILF3Q12906 894 aaKnown RBP eCLIP16.09■□□□□ 0.17
CUX2-202ENST00000397643 HEATR4Q86WZ0 1026 aa16.09■□□□□ 0.17
CUX2-202ENST00000397643 C9orf43Q8TAL5 461 aaPredicted RBP16.09■□□□□ 0.17
CUX2-202ENST00000397643 SPOCK2Q92563 424 aa16.09■□□□□ 0.17
CUX2-202ENST00000397643 SUDS3Q9H7L9 328 aaPredicted RBP16.09■□□□□ 0.17
CUX2-202ENST00000397643 ZNF71Q9NQZ8 489 aaPredicted RBP16.09■□□□□ 0.17
CUX2-202ENST00000397643 SUFUQ9UMX1 484 aa16.09■□□□□ 0.17
CUX2-202ENST00000397643 ICE1Q9Y2F5 2266 aa16.08■□□□□ 0.17
CUX2-202ENST00000397643 A8MX80 341 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 GOLGA6L6A8MZA4 724 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 PDE2AO00408 941 aaPredicted RBP16.08■□□□□ 0.16
CUX2-202ENST00000397643 CASP14P31944 242 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 GNPDA1P46926 289 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 ZNF143P52747 638 aaPredicted RBP16.08■□□□□ 0.16
CUX2-202ENST00000397643 NDST2P52849 883 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 CNGA3Q16281 694 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 ANKS6Q68DC2 871 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 SCYL2Q6P3W7 929 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 SLC30A9Q6PML9 568 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 ARHGAP12Q8IWW6 846 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 FAM26EQ8N5C1 309 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 C3orf20Q8ND61 904 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 CCDC112Q8NEF3 446 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 NUS1Q96E22 293 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 SLC39A8Q9C0K1 460 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 SLC39A1Q9NY26 324 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 ADAM22Q9P0K1 906 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 PDP2Q9P2J9 529 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 B4GALT6Q9UBX8 382 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 PLAAQ9Y263 795 aa16.08■□□□□ 0.16
CUX2-202ENST00000397643 LRRC53A6NM62 1247 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 SIGLEC16A6NMB1 481 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 EFCAB7A8K855 629 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 AKR1B15C9JRZ8 316 aaPredicted RBP16.07■□□□□ 0.16
CUX2-202ENST00000397643 FERP16591 822 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 OAS2P29728 719 aaKnown RBP16.07■□□□□ 0.16
CUX2-202ENST00000397643 CSTF2P33240 577 aaKnown RBP eCLIP16.07■□□□□ 0.16
CUX2-202ENST00000397643 PAPOLAP51003 745 aaKnown RBP16.07■□□□□ 0.16
CUX2-202ENST00000397643 AIF1P55008 147 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 CDK3Q00526 305 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 CTBSQ01459 385 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms