RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 VIPR1P32241 457 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 COPAP53621 1224 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 MPP1Q00013 466 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 SATB1Q01826 763 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 RALGDSQ12967 914 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 BMPR2Q13873 1038 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 FBXO43Q4G163 708 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 GRTP1Q5TC63 336 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 DPPA4Q7L190 304 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 CILP2Q8IUL8 1156 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 LMNTD2Q8IXW0 634 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 PPP1R16AQ96I34 528 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 TXNDC16Q9P2K2 825 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 A0A1W2PPM1 405 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 GAPDHSO14556 408 aaPredicted RBP27.46■■□□□ 1.99
CPNE1-203ENST00000397442 C1SP09871 688 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 CYP2A6P11509 494 aaPredicted RBP27.46■■□□□ 1.99
CPNE1-203ENST00000397442 BPIP17213 487 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 KRT15P19012 456 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 MMP12P39900 470 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 CSE1LP55060 971 aaKnown RBP27.46■■□□□ 1.99
CPNE1-203ENST00000397442 SEMA3AQ14563 771 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 SDE2Q6IQ49 451 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 AFTPHQ6ULP2 937 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 TRMT11Q7Z4G4 463 aaKnown RBP27.46■■□□□ 1.99
CPNE1-203ENST00000397442 ZNF687Q8N1G0 1237 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 TRIOO75962 3097 aa27.45■■□□□ 1.98
CPNE1-203ENST00000397442 TRIM49D1C9J1S8 452 aa27.45■■□□□ 1.98
CPNE1-203ENST00000397442 MAN2B1O00754 1011 aa27.45■■□□□ 1.98
CPNE1-203ENST00000397442 CD3EAPO15446 510 aaKnown RBP27.45■■□□□ 1.98
CPNE1-203ENST00000397442 KRT37O76014 449 aa27.45■■□□□ 1.98
CPNE1-203ENST00000397442 KRT38O76015 456 aa27.45■■□□□ 1.98
CPNE1-203ENST00000397442 SNRPAP09012 282 aaKnown RBP27.45■■□□□ 1.98
CPNE1-203ENST00000397442 CREB1P16220 341 aa27.45■■□□□ 1.98
CPNE1-203ENST00000397442 ZNF30P17039 623 aa27.45■■□□□ 1.98
CPNE1-203ENST00000397442 COL9A1P20849 921 aa27.45■■□□□ 1.98
CPNE1-203ENST00000397442 XPAP23025 273 aaPredicted RBP27.45■■□□□ 1.98
CPNE1-203ENST00000397442 FOXN2P32314 431 aa27.45■■□□□ 1.98
CPNE1-203ENST00000397442 STC1P52823 247 aa27.45■■□□□ 1.98
CPNE1-203ENST00000397442 KIAA0408Q6ZU52 694 aa27.45■■□□□ 1.98
CPNE1-203ENST00000397442 CBARPQ8N350 705 aaPredicted RBP27.45■■□□□ 1.98
CPNE1-203ENST00000397442 OR2T3Q8NH03 318 aa27.45■■□□□ 1.98
CPNE1-203ENST00000397442 PBXIP1Q96AQ6 731 aa27.45■■□□□ 1.98
CPNE1-203ENST00000397442 HDAC8Q9BY41 377 aa27.45■■□□□ 1.98
CPNE1-203ENST00000397442 AREL1O15033 823 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 ITGA2BP08514 1039 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 PRSS56P0CW18 603 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 ADRB3P13945 408 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 HOXB2P14652 356 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 CNTFP26441 200 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 MC4RP32245 332 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 ABCG1P45844 678 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 LIMK2P53671 638 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 CST6Q15828 149 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 LGSNQ5TDP6 509 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 MROH9Q5TGP6 573 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 FAM46CQ5VWP2 391 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 ERN2Q76MJ5 926 aaKnown RBP27.44■■□□□ 1.98
CPNE1-203ENST00000397442 LDB1Q86U70 411 aaPredicted RBP27.44■■□□□ 1.98
CPNE1-203ENST00000397442 ZC3HC1Q86WB0 502 aaKnown RBP27.44■■□□□ 1.98
CPNE1-203ENST00000397442 SRRM1Q8IYB3 904 aaKnown RBP27.44■■□□□ 1.98
CPNE1-203ENST00000397442 MKRN2Q9H000 416 aaKnown RBP27.44■■□□□ 1.98
CPNE1-203ENST00000397442 IL26Q9NPH9 171 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 CATSPERZQ9NTU4 200 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 CA14Q9ULX7 337 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 NDRG2Q9UN36 371 aaKnown RBP27.44■■□□□ 1.98
CPNE1-203ENST00000397442 ITM2BQ9Y287 266 aa27.44■■□□□ 1.98
CPNE1-203ENST00000397442 NFKBIAP25963 317 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 DRD3P35462 400 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 LEPRP48357 1165 aaKnown RBP27.43■■□□□ 1.98
CPNE1-203ENST00000397442 ZNF789Q5FWF6 425 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 FBXL19Q6PCT2 694 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 RFLNAQ6ZTI6 216 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 GALNT7Q86SF2 657 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 RPLP0P6Q8NHW5 317 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 SERAC1Q96JX3 654 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 ARHGEF3Q9NR81 526 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 FNDC3AQ9Y2H6 1198 aaKnown RBP27.43■■□□□ 1.98
CPNE1-203ENST00000397442 MID1O15344 667 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 HAUS5O94927 633 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 S1PR4O95977 384 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 SPRP35270 261 aaPredicted RBP27.43■■□□□ 1.98
CPNE1-203ENST00000397442 P2RY2P41231 377 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 NEK3P51956 506 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 RPS14P62263 151 aaKnown RBP27.43■■□□□ 1.98
CPNE1-203ENST00000397442 CNTN1Q12860 1018 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 ARHGEF7Q14155 803 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 STARD3Q14849 445 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 ERAP2Q6P179 960 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 ZNF852Q6ZMS4 543 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 AADATQ8N5Z0 425 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 GPR26Q8NDV2 337 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 MTBPQ96DY7 904 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 RHOJQ9H4E5 214 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 DYRK4Q9NR20 520 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 FBXO6Q9NRD1 293 aaPredicted RBP27.43■■□□□ 1.98
CPNE1-203ENST00000397442 ACTL7BQ9Y614 415 aa27.43■■□□□ 1.98
CPNE1-203ENST00000397442 RNASEH1O60930 286 aaKnown RBP27.42■■□□□ 1.98
CPNE1-203ENST00000397442 OGNP20774 298 aaKnown RBP27.42■■□□□ 1.98
CPNE1-203ENST00000397442 CDKN1CP49918 316 aaPredicted RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms