RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 A0A075B6Q4 140 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 APOC4-APOC2K7ER74 178 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 APOC2P02655 101 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 DNASE1L1P49184 302 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 RPL14P50914 215 aaKnown RBP17.43■□□□□ 0.38
MCF2L-208ENST00000397030 LGALS3BPQ08380 585 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 ATP1A4Q13733 1029 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 ENPP7Q6UWV6 458 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 OXNAD1Q96HP4 312 aaPredicted RBP17.43■□□□□ 0.38
MCF2L-208ENST00000397030 ARHGEF4Q9NR80 690 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 NINJ2Q9NZG7 142 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 SATB2Q9UPW6 733 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 RYKP34925 604 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 NRG1Q02297 640 aaPredicted RBP17.43■□□□□ 0.38
MCF2L-208ENST00000397030 ZSCAN1Q8NBB4 408 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 SEMA4AQ9H3S1 761 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 ZMPSTE24O75844 475 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 CCKBRP32239 447 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 PRKAA2P54646 552 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 CDK18Q07002 472 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 SAMD4BQ5PRF9 694 aaKnown RBP17.43■□□□□ 0.38
MCF2L-208ENST00000397030 HIPK1Q86Z02 1210 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 BPIFB6Q8NFQ5 453 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 ZNF398Q8TD17 642 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 RNF31Q96EP0 1072 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 COMMD9Q9P000 198 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 CORO2BQ9UQ03 480 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 SIGLEC16A6NMB1 481 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 GNB5O14775 395 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 ARHGDIBP52566 201 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 ZNF143P52747 638 aaPredicted RBP17.43■□□□□ 0.38
MCF2L-208ENST00000397030 PCDH1Q08174 1060 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 TMEM119Q4V9L6 283 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 UBXN11Q5T124 520 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 SLC8B1Q6J4K2 584 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 SLC30A6Q6NXT4 461 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 KREMEN2Q8NCW0 462 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 B3GALT6Q96L58 329 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 TCRBV5S4A2TA0A5A2 114 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 MAGEA13PA6NCF6 341 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 TRAPPC6AO75865 159 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 CCL5P13501 91 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 CYP4B1P13584 511 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 CDH5P33151 784 aaPredicted RBP17.43■□□□□ 0.38
MCF2L-208ENST00000397030 GAD2Q05329 585 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 FAM110CQ1W6H9 321 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 RTL4Q6ZR62 310 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 MON1AQ86VX9 555 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 CAMK1DQ8IU85 385 aa17.43■□□□□ 0.38
MCF2L-208ENST00000397030 AXIN1O15169 862 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 EPHB6O15197 1021 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 SERPINB7O75635 380 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 OTCP00480 354 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 RPL3P39023 403 aaKnown RBP17.42■□□□□ 0.38
MCF2L-208ENST00000397030 MAMLD1Q13495 774 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 RFX4Q33E94 735 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 ZMIZ2Q8NF64 920 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 CCDC177Q9NQR7 707 aaPredicted RBP17.42■□□□□ 0.38
MCF2L-208ENST00000397030 PHF24Q9UPV7 400 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 SMIM35A0A1B0GVV1 85 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 PSIP1O75475 530 aaKnown RBP17.42■□□□□ 0.38
MCF2L-208ENST00000397030 ME2P23368 584 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 CLCN5P51795 746 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 DDX18Q9NVP1 670 aaKnown RBP17.42■□□□□ 0.38
MCF2L-208ENST00000397030 EHD3Q9NZN3 535 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 RPS6KA6Q9UK32 745 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 CHRNGP07510 517 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 MYL9P24844 172 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 RPIAP49247 311 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 ZNF135P52742 658 aaPredicted RBP17.42■□□□□ 0.38
MCF2L-208ENST00000397030 SLC5A3P53794 718 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 RRP1BQ14684 758 aaKnown RBP17.42■□□□□ 0.38
MCF2L-208ENST00000397030 ZDHHC20Q5W0Z9 365 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 PLEKHA1Q9HB21 404 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 CHST7Q9NS84 486 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 EXD2Q9NVH0 621 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 CPQQ9Y646 472 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 PNMA8CA0A1B0GUJ8 204 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 ZBTB22O15209 634 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 ZNF8P17098 575 aaPredicted RBP17.42■□□□□ 0.38
MCF2L-208ENST00000397030 AHCYP23526 432 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 GRIA4P48058 902 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 NRF1Q16656 503 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 SPRYD7Q5W111 196 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 ADHFE1Q8IWW8 467 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 TOP6BLQ8N6T0 577 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 PIGUQ9H490 435 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 ARHGAP20Q9P2F6 1191 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 RAI2Q9Y5P3 530 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 KERAO60938 352 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 AQP1P29972 269 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 GRM5P41594 1212 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 RTP1P59025 263 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 HECTD2Q5U5R9 776 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 UNC5BQ8IZJ1 945 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 CD101Q93033 1021 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 DSN1Q9H410 356 aa17.42■□□□□ 0.38
MCF2L-208ENST00000397030 SPATA31C2B4DYI2 1134 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 AGXTP21549 392 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 SLC6A2P23975 617 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms