RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 IRF4Q15306 451 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 KCTD19Q17RG1 926 aaPredicted RBP16.4■□□□□ 0.22
AP1S3-202ENST00000396653 WSCD2Q2TBF2 565 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 ANKRD22Q5VYY1 191 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 IZUMO3Q5VZ72 239 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 ZDHHC20Q5W0Z9 365 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 DENND2CQ68D51 928 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 ESRP1Q6NXG1 681 aaKnown RBP16.4■□□□□ 0.22
AP1S3-202ENST00000396653 Q6ZVL8 140 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 ABI3BPQ7Z7G0 1075 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 ZCCHC9Q8N567 271 aaKnown RBP16.4■□□□□ 0.22
AP1S3-202ENST00000396653 BBOF1Q8ND07 529 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 PIGKQ92643 395 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 EID2BQ96D98 161 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 SLC6A18Q96N87 628 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 ERP44Q9BS26 406 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 FRMD8Q9BZ67 464 aaPredicted RBP16.4■□□□□ 0.22
AP1S3-202ENST00000396653 MIR1-1HGQ9H1L0 117 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 XAB2Q9HCS7 855 aaKnown RBP16.4■□□□□ 0.22
AP1S3-202ENST00000396653 TM9SF3Q9HD45 589 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.4■□□□□ 0.22
AP1S3-202ENST00000396653 PCDH15Q96QU1 1955 aa16.4■□□□□ 0.22
AP1S3-202ENST00000396653 ATXN2Q99700 1313 aaKnown RBP16.4■□□□□ 0.22
AP1S3-202ENST00000396653 A0A0U1RQS6 177 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 A0A1W2PR77 199 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 A6NNZ2 444 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 FPGTO14772 594 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 AURKAO14965 403 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 RAD51BO15315 384 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 LRP3O75074 770 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 LPOP22079 712 aaPredicted RBP16.39■□□□□ 0.21
AP1S3-202ENST00000396653 IGFALSP35858 605 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 NPY2RP49146 381 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 AFF3P51826 1226 aaKnown RBP16.39■□□□□ 0.21
AP1S3-202ENST00000396653 STAT4Q14765 748 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 TEAD4Q15561 434 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 DUOXA1Q1HG43 343 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 GLE1Q53GS7 698 aaKnown RBP16.39■□□□□ 0.21
AP1S3-202ENST00000396653 PLA2G2CQ5R387 149 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 GCNT7Q6ZNI0 430 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 MFSD2AQ8NA29 543 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 DTX3LQ8TDB6 740 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 PEX13Q92968 403 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 SKA1Q96BD8 255 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 PLEKHG4BQ96PX9 1271 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 CARD6Q9BX69 1037 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 IL22Q9GZX6 179 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 FZD3Q9NPG1 666 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 TMEM74BQ9NUR3 256 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 BFARQ9NZS9 450 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 IL17CQ9P0M4 197 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 RIMKLBQ9ULI2 386 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 UTP11Q9Y3A2 253 aaKnown RBP16.39■□□□□ 0.21
AP1S3-202ENST00000396653 SLCO1B1Q9Y6L6 691 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 WDFY4Q6ZS81 3184 aa16.39■□□□□ 0.21
AP1S3-202ENST00000396653 HEATR9A2RTY3 570 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 LDB2O43679 373 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 MAGEC1O60732 1142 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 TSHRP16473 764 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 PSMA3P25788 255 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 CD38P28907 300 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 MAGEA3P43357 314 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 RPL21P46778 160 aaKnown RBP16.38■□□□□ 0.21
AP1S3-202ENST00000396653 ZNF140P52738 457 aaPredicted RBP16.38■□□□□ 0.21
AP1S3-202ENST00000396653 PFN3P60673 137 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 POU6F1Q14863 301 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 HENMT1Q5T8I9 393 aaKnown RBP16.38■□□□□ 0.21
AP1S3-202ENST00000396653 DUPD1Q68J44 220 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 HIBCHQ6NVY1 386 aaPredicted RBP16.38■□□□□ 0.21
AP1S3-202ENST00000396653 SLC23A3Q6PIS1 610 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 PTCD2Q8WV60 388 aaKnown RBP16.38■□□□□ 0.21
AP1S3-202ENST00000396653 AP2M1Q96CW1 435 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 SERPINB12Q96P63 405 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 MYOCQ99972 504 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 ABCG8Q9H221 673 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 ARRDC1-AS1Q9H2J1 176 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 FAM83DQ9H4H8 585 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 MBNL1Q9NR56 388 aaKnown RBP16.38■□□□□ 0.21
AP1S3-202ENST00000396653 AASDHPPTQ9NRN7 309 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 GPR27Q9NS67 375 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 WHRNQ9P202 907 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 NCDNQ9UBB6 729 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 PKP3Q9Y446 797 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 ARL5AQ9Y689 179 aa16.38■□□□□ 0.21
AP1S3-202ENST00000396653 VILLO15195 856 aa16.37■□□□□ 0.21
AP1S3-202ENST00000396653 STX7O15400 261 aaKnown RBP16.37■□□□□ 0.21
AP1S3-202ENST00000396653 SLC4A1P02730 911 aa16.37■□□□□ 0.21
AP1S3-202ENST00000396653 BPIP17213 487 aa16.37■□□□□ 0.21
AP1S3-202ENST00000396653 TPH1P17752 444 aa16.37■□□□□ 0.21
AP1S3-202ENST00000396653 ADRA1DP25100 572 aa16.37■□□□□ 0.21
AP1S3-202ENST00000396653 SPAM1P38567 509 aa16.37■□□□□ 0.21
AP1S3-202ENST00000396653 HADHAP40939 763 aa16.37■□□□□ 0.21
AP1S3-202ENST00000396653 RABIFP47224 123 aa16.37■□□□□ 0.21
AP1S3-202ENST00000396653 TERF1P54274 439 aa16.37■□□□□ 0.21
AP1S3-202ENST00000396653 DRG2P55039 364 aaKnown RBP16.37■□□□□ 0.21
AP1S3-202ENST00000396653 YPEL5P62699 121 aa16.37■□□□□ 0.21
AP1S3-202ENST00000396653 PCID2Q5JVF3 399 aa16.37■□□□□ 0.21
AP1S3-202ENST00000396653 CERCAMQ5T4B2 595 aa16.37■□□□□ 0.21
AP1S3-202ENST00000396653 PDPK2PQ6A1A2 396 aa16.37■□□□□ 0.21
AP1S3-202ENST00000396653 NLRP9Q7RTR0 991 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms