RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 HEXIM1O94992 359 aaKnown RBP17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 PYGLP06737 847 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 MAP4P27816 1152 aaKnown RBP17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 POLE2P56282 527 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 CDK3Q00526 305 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 DPTQ07507 201 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 LBRQ14739 615 aaKnown RBP17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 KRT31Q15323 416 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 CDKAL1Q5VV42 579 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 ACAD10Q6JQN1 1059 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 TMEM71Q6P5X7 295 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 SFTPA2Q8IWL1 248 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 MCOLN2Q8IZK6 566 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 RCBTB1Q8NDN9 531 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 ART4Q93070 314 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 KIAA1143Q96AT1 154 aaPredicted RBP17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 DTD2Q96FN9 168 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 SCARF2Q96GP6 870 aaPredicted RBP17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 SLC45A3Q96JT2 553 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 TRIT1Q9H3H1 467 aaKnown RBP17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 SLC39A1Q9NY26 324 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 SUFUQ9UMX1 484 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 SIK3Q9Y2K2 1263 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 IGHV1OR21-1A0A087WYE8 117 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 DFFAO00273 331 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 THRAP10827 490 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 ERCC2P18074 760 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 CASRP41180 1078 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 GNPDA1P46926 289 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 FASLGP48023 281 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 CTBSQ01459 385 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 MC1RQ01726 317 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 LRP8Q14114 963 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 UBAP2LQ14157 1087 aaKnown RBP17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 CNGA3Q16281 694 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 SLC30A9Q6PML9 568 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 NLRP8Q86W28 1048 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 ARHGAP12Q8IWW6 846 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 NAGSQ8N159 534 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 NDUFAF2Q8N183 169 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 SCRN2Q96FV2 425 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 PCMTD1Q96MG8 357 aaPredicted RBP17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 NUP62CLQ9H1M0 184 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 KCNK4Q9NYG8 393 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 B3GALT1Q9Y5Z6 326 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 LRP4O75096 1905 aa17.47■□□□□ 0.39
EXOSC3-202ENST00000396521 A8MX80 341 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 AGRPO00253 132 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 EPHB6O15197 1021 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 PRPSAP2O60256 369 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 RAD1O60671 282 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 ATP1A3P13637 1013 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 LIFP15018 202 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 FERP16591 822 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 PSMA2P25787 234 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 ADCY8P40145 1251 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 NOP2P46087 812 aaKnown RBP17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 KLK7P49862 253 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 ZNF235Q14590 738 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 CRTC2Q53ET0 693 aaPredicted RBP17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 USP45Q70EL2 814 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 RAVER1Q8IY67 606 aaKnown RBP17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 OR10G6Q8NH81 332 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 FNIP1Q8TF40 1166 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 JPH3Q8WXH2 748 aaPredicted RBP17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 AHCYL2Q96HN2 611 aaKnown RBP17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 NUDCD1Q96RS6 583 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 ZWILCHQ9H900 591 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 ANKMY1Q9P2S6 941 aa17.46■□□□□ 0.39
EXOSC3-202ENST00000396521 PPM1DO15297 605 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 DUX1O43812 170 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 CPP00450 1065 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 FUCA1P04066 466 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 AK4P27144 223 aaPredicted RBP17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 ACTR1BP42025 376 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 ARSDP51689 593 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 ACTR1AP61163 376 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 MAMLD1Q13495 774 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 RAET1GQ6H3X3 334 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 WDR74Q6RFH5 385 aaPredicted RBP17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 CEACAM20Q6UY09 585 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 ADAMTSL4Q6UY14 1074 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 PELI3Q8N2H9 469 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 NSMCE1Q8WV22 266 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 SH3KBP1Q96B97 665 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 OR2M4Q96R27 311 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 MCCC1Q96RQ3 725 aaPredicted RBP17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 GPN2Q9H9Y4 310 aaPredicted RBP17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 FBXO8Q9NRD0 319 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 PILRAQ9UKJ1 303 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 PPIL1Q9Y3C6 166 aa17.45■□□□□ 0.38
EXOSC3-202ENST00000396521 CR2P20023 1033 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 ETV3P41162 512 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 FOXK1P85037 733 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 SLC10A7Q0GE19 358 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 PPP6R3Q5H9R7 873 aaPredicted RBP17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 PLEKHA7Q6IQ23 1121 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 Q6ZVL8 140 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 FAM129CQ86XR2 697 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 LRRC49Q8IUZ0 686 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms