RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 RSL24D1Q9UHA3 163 aaKnown RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 SAMHD1Q9Y3Z3 626 aaKnown RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 HES2Q9Y543 173 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 UGT2B17O75795 530 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 EOMESO95936 686 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 TCF4P15884 667 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 NR1H2P55055 460 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 ELF3P78545 371 aaPredicted RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 TUSC3Q13454 348 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 ITGA7Q13683 1181 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 SF1Q15637 639 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 CPSF6Q16630 551 aaKnown RBP eCLIP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 KBTBD8Q8NFY9 601 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 DCUN1D5Q9BTE7 237 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 AGO3Q9H9G7 860 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 TRPS1Q9UHF7 1281 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 PLLPQ9Y342 182 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 TISP43B9A030 160 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 H3BM21 787 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 FFAR3O14843 346 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 GPR42O15529 346 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 CHST10O43529 356 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 TAL1P17542 331 aaPredicted RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 ITGB5P18084 799 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 PTDSS1P48651 473 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 CTBP1Q13363 440 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 DCTN2Q13561 401 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 NAIF1Q69YI7 327 aaPredicted RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 DHDDSQ86SQ9 333 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 RASAL3Q86YV0 1011 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 CYP4X1Q8N118 509 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 EFCAB3Q8N7B9 438 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 SNRNP27Q8WVK2 155 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 PPCDCQ96CD2 204 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 DSN1Q9H410 356 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 PPIEQ9UNP9 301 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 BCL9LQ86UU0 1499 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 A0A0J9YYE9 177 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 H0Y858 1186 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 PRMT5O14744 637 aaPredicted RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 KHDRBS3O75525 346 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 IGFBP4P22692 258 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 GABRR2P28476 465 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 IL17AQ16552 155 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 ATP13A5Q4VNC0 1218 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 SLC26A9Q7LBE3 791 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 FAM35AQ86V20 835 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 C17orf64Q86WR6 236 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 HEATR4Q86WZ0 1026 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 RASGEF1CQ8N431 466 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 OR4A15Q8NGL6 344 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 LGMNQ99538 433 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 HMGXB4Q9UGU5 601 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 SH3GLB1Q9Y371 365 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 PEAK1Q9H792 1746 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 SH3BGRLO75368 114 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 ANPEPP15144 967 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 CDYL2Q8N8U2 506 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 EXO5Q9H790 373 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 ZDHHC4Q9NPG8 344 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 PTGFRNQ9P2B2 879 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 XPR1Q9UBH6 696 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 MOXD2PA6NHM9 499 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 UGT2B11O75310 529 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 SASH3O75995 380 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 KLHL18O94889 574 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 GLUD1P00367 558 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 PSME3P61289 254 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 RHAGQ02094 409 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 RGMBQ6NW40 437 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 FAM171BQ6P995 826 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 RTL4Q6ZR62 310 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 OAFQ86UD1 273 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 SFRP1Q8N474 314 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 SLC47A1Q96FL8 570 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 WDR12Q9GZL7 423 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 CDH19Q9H159 772 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 LRRC4CQ9HCJ2 640 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 PNPLA3Q9NST1 481 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 CKLFQ9UBR5 152 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 COL14A1Q05707 1796 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 FAM86C2PA6NEL3 165 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 MCIDASD6RGH6 385 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 PLK4O00444 970 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 SLC28A2O43868 658 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 RPP40O75818 363 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 CLDN9O95484 217 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 ZBTB48P10074 688 aaPredicted RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 ZNF37AP17032 561 aaPredicted RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 PTX3P26022 381 aaPredicted RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 ARHGDIBP52566 201 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 MAXP61244 160 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 BST1Q10588 318 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 TRAP1Q12931 704 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 LARS2Q15031 903 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 MAPK11Q15759 364 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 TTMPQ5BVD1 217 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 CAPN13Q6MZZ7 669 aaPredicted RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 UBE2R2Q712K3 238 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms