RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ABCG8Q9H221 673 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 GOLPH3Q9H4A6 298 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 CYP4F12Q9HCS2 524 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 SPATS2LQ9NUQ6 558 aaKnown RBP8.85□□□□□ -0.99
ATG4A-205ENST00000394892 GULP1Q9UBP9 304 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 CD84Q9UIB8 345 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 CNOT6Q9ULM6 557 aaKnown RBP8.85□□□□□ -0.99
ATG4A-205ENST00000394892 GPR34Q9UPC5 381 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 CHKBQ9Y259 395 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 A0A0J9YYE9 177 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 PRSS38A1L453 326 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 RCCD1A6NED2 376 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 TNFRSF10CO14798 259 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 DXOO77932 396 aaKnown RBP8.84□□□□□ -0.99
ATG4A-205ENST00000394892 TNFP01375 233 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 JCHAINP01591 159 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 TRBC1P01850 177 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 CCNB1P14635 433 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 AK4P27144 223 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-205ENST00000394892 NOP2P46087 812 aaKnown RBP8.84□□□□□ -0.99
ATG4A-205ENST00000394892 LSSP48449 732 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 MARCKSL1P49006 195 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 STC1P52823 247 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 POLR2LP62875 67 aaKnown RBP8.84□□□□□ -0.99
ATG4A-205ENST00000394892 GABREP78334 506 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 CCL7P80098 99 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 CDK3Q00526 305 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 HLTFQ14527 1009 aaKnown RBP eCLIP8.84□□□□□ -0.99
ATG4A-205ENST00000394892 LLGL1Q15334 1064 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 ELOCQ15369 112 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 TAZQ16635 292 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 IFI16Q16666 785 aaKnown RBP8.84□□□□□ -0.99
ATG4A-205ENST00000394892 QPCTQ16769 361 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 RALGPS1Q5JS13 557 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 ARMC12Q5T9G4 340 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 LRRC66Q68CR7 880 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 LVRNQ6Q4G3 990 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 PCSK4Q6UW60 755 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 MFSD7Q6UXD7 560 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 TRIM74Q86UV6 250 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 HEATR4Q86WZ0 1026 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 ARL10Q8N8L6 244 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 GPBAR1Q8TDU6 330 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 PATE1Q8WXA2 126 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 TADA1Q96BN2 335 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 NUS1Q96E22 293 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 SCARF2Q96GP6 870 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-205ENST00000394892 OLFM3Q96PB7 478 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 DEPDC7Q96QD5 511 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 TRIB3Q96RU7 358 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 HERPUD2Q9BSE4 406 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 TDRD1Q9BXT4 1180 aaKnown RBP8.84□□□□□ -0.99
ATG4A-205ENST00000394892 WDR26Q9H7D7 661 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 SAE1Q9UBE0 346 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-205ENST00000394892 SLC17A4Q9Y2C5 497 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 TMEM98Q9Y2Y6 226 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 OAS3Q9Y6K5 1087 aaKnown RBP8.84□□□□□ -0.99
ATG4A-205ENST00000394892 RNF215Q9Y6U7 377 aa8.84□□□□□ -0.99
ATG4A-205ENST00000394892 LRRD1A4D1F6 860 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 ZNF487B1APH4 448 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 PSMD11O00231 422 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 CACNB4O00305 520 aaPredicted RBP8.83□□□□□ -1
ATG4A-205ENST00000394892 CBFA2T2O43439 604 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 B4GAT1O43505 415 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 AKR1B10O60218 316 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 CLDN7O95471 211 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 EML2O95834 649 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 FGF1P05230 155 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 KRT7P08729 469 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 MYCLP1P12525 358 aaPredicted RBP8.83□□□□□ -1
ATG4A-205ENST00000394892 CTSEP14091 401 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 PTMSP20962 102 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 COMTP21964 271 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 HTR1BP28222 390 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 TEAD1P28347 426 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 BLKP51451 505 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 MAZP56270 477 aaKnown RBP8.83□□□□□ -1
ATG4A-205ENST00000394892 ERVPABLB-1P60509 514 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 IFI35P80217 286 aaPredicted RBP8.83□□□□□ -1
ATG4A-205ENST00000394892 B4GALNT1Q00973 533 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 DPTQ07507 201 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 PPIDQ08752 370 aaKnown RBP8.83□□□□□ -1
ATG4A-205ENST00000394892 TRIM14Q14142 442 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 SARM1Q6SZW1 724 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 RBM44Q6ZP01 1051 aaKnown RBP8.83□□□□□ -1
ATG4A-205ENST00000394892 TAF8Q7Z7C8 310 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 GAS2L3Q86XJ1 694 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 CCDC13Q8IYE1 715 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 SDR16C5Q8N3Y7 309 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 FAM46DQ8NEK8 389 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 TPCN2Q8NHX9 752 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 RNF25Q96BH1 459 aaPredicted RBP8.83□□□□□ -1
ATG4A-205ENST00000394892 HDAC11Q96DB2 347 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 CCDC97Q96F63 343 aaPredicted RBP8.83□□□□□ -1
ATG4A-205ENST00000394892 NAF1Q96HR8 494 aaKnown RBP8.83□□□□□ -1
ATG4A-205ENST00000394892 COX14Q96I36 57 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 SLC46A1Q96NT5 459 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 RIOK2Q9BVS4 552 aaKnown RBP8.83□□□□□ -1
ATG4A-205ENST00000394892 DPH1Q9BZG8 443 aa8.83□□□□□ -1
ATG4A-205ENST00000394892 FOXP3Q9BZS1 431 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms