RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 BNC1Q01954 994 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 EPS8Q12929 822 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 RAPSNQ13702 412 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 STRADAQ7RTN6 431 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 PROSER1Q86XN7 944 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 CKAP2Q8WWK9 683 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 ANKRD27Q96NW4 1050 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 TNKS2Q9H2K2 1166 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 RAB21Q9UL25 225 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 ZNF214Q9UL59 606 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-203ENST00000394872 SH3GLB1Q9Y371 365 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 RAP2CQ9Y3L5 183 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 RAI2Q9Y5P3 530 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 ADGRB1O14514 1584 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 A0A087WXM4 84 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 INTS6LQ5JSJ4 861 aaKnown RBP10.39□□□□□ -0.75
COL4A6-203ENST00000394872 FUT10Q6P4F1 479 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 FAM98AQ8NCA5 519 aaKnown RBP10.39□□□□□ -0.75
COL4A6-203ENST00000394872 BAP1Q92560 729 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 WRAP53Q9BUR4 548 aaKnown RBP10.39□□□□□ -0.75
COL4A6-203ENST00000394872 LHX5Q9H2C1 402 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 PTGFRNQ9P2B2 879 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 VWA7Q9Y334 891 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 KIF1AQ12756 1690 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 BTNL10A8MVZ5 291 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 PSMG1O95456 288 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 TACR2P21452 398 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 SLC6A2P23975 617 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 PSME3P61289 254 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 NDUFA9Q16795 377 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 ZIK1Q3SY52 487 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-203ENST00000394872 KLHL12Q53G59 568 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 CERCAMQ5T4B2 595 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 RFWD3Q6PCD5 774 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 KRT74Q7RTS7 529 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 CAMK1DQ8IU85 385 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 GALNT13Q8IUC8 556 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-203ENST00000394872 NPAS4Q8IUM7 802 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 C10orf107Q8IVU9 208 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 EEF1AKMT1Q8WVE0 214 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 BRINP2Q9C0B6 783 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 NUAK2Q9H093 628 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 SEMA3GQ9NS98 782 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 KCTD5Q9NXV2 234 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 CD84Q9UIB8 345 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 ZFP37Q9Y6Q3 630 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-203ENST00000394872 H3BM21 787 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 B4GALT4O60513 344 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 SNUPNO95149 360 aaKnown RBP10.38□□□□□ -0.75
COL4A6-203ENST00000394872 IDSP22304 550 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 RCVRNP35243 200 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 SLC25A3Q00325 362 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 SEMA5AQ13591 1074 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 TAB1Q15750 504 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 FNBP1LQ5T0N5 605 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 TAF8Q7Z7C8 310 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 RIPOR3Q96MK2 946 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 EQTNQ9NQ60 294 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 PCDHA2Q9Y5H9 948 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 TOP3BO95985 862 aaKnown RBP10.38□□□□□ -0.75
COL4A6-203ENST00000394872 PRNPP04156 253 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 ABHD2P08910 425 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 AKT2P31751 481 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 USP46P62068 366 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 SPIRE1Q08AE8 756 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 PIWIL4Q7Z3Z4 852 aaKnown RBP10.38□□□□□ -0.75
COL4A6-203ENST00000394872 CCDC185Q8N715 623 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 LRRN4CLQ8ND94 238 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 METTL21AQ8WXB1 218 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 ART4Q93070 314 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 CAB39LQ9H9S4 337 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 DDX18Q9NVP1 670 aaKnown RBP10.38□□□□□ -0.75
COL4A6-203ENST00000394872 OGDHLQ9ULD0 1010 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 SORCS3Q9UPU3 1222 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 RIPK3Q9Y572 518 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 RGSL1A5PLK6 1076 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 CST1P01037 141 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 PTPN2P17706 415 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 SPAM1P38567 509 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 UBAP2LQ14157 1087 aaKnown RBP10.38□□□□□ -0.75
COL4A6-203ENST00000394872 SPRYD7Q5W111 196 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 LINGO4Q6UY18 593 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 OTOP3Q7RTS5 596 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 ZBTB2Q8N680 514 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 LENG1Q96BZ8 264 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-203ENST00000394872 LMLNQ96KR4 655 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 KCTD15Q96SI1 283 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-203ENST00000394872 CDADC1Q9BWV3 514 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 PDZD7Q9H5P4 517 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 EHD3Q9NZN3 535 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 LRCH1Q9Y2L9 728 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 ATXN2Q99700 1313 aaKnown RBP10.38□□□□□ -0.75
COL4A6-203ENST00000394872 TSPAN1O60635 241 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 ADSLP30566 484 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-203ENST00000394872 PTPN9P43378 593 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 EVX2Q03828 476 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 C9orf64Q5T6V5 341 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 IKBIPQ70UQ0 350 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 NET1Q7Z628 596 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms