RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 RGS18Q9NS28 235 aa12.5□□□□□ -0.41
PPP3CB-204ENST00000394829 DUS2Q9NX74 493 aaKnown RBP12.5□□□□□ -0.41
PPP3CB-204ENST00000394829 MAP10Q9P2G4 905 aa12.5□□□□□ -0.41
PPP3CB-204ENST00000394829 PADI4Q9UM07 663 aa12.5□□□□□ -0.41
PPP3CB-204ENST00000394829 A0A0J9YYE9 177 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 NR5A2O00482 541 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 NME4O00746 187 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 AKAP10O43572 662 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 MGEA5O60502 916 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 H6PDO95479 791 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 CYP11A1P05108 521 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 UGT1A6P19224 532 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 HTR7P34969 479 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 RENBPP51606 427 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 PRKCQQ04759 706 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 GRB7Q14451 532 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 VPS26BQ4G0F5 336 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 ALFQ53S48 1182 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 MARC1Q5VT66 337 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 C17orf99Q6UX52 265 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 DIS3LQ8TF46 1054 aaKnown RBP12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 PSMG2Q969U7 264 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 TBATAQ96M53 351 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 KCNA7Q96RP8 456 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 TRIM62Q9BVG3 475 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 TRIM8Q9BZR9 551 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 MRGBPQ9NV56 204 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 UXTQ9UBK9 157 aaPredicted RBP12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 EGFL7Q9UHF1 273 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 ARHGAP10A1A4S6 786 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 MROH6A6NGR9 719 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 SLC7A4O43246 635 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 CDK14O94921 469 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 ETFBP38117 255 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 STX1BP61266 288 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 HERVK_113P63132 956 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 TIAL1Q01085 375 aaKnown RBP eCLIP12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 PLOD1Q02809 727 aaPredicted RBP12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 KRT80Q6KB66 452 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 ZNF549Q6P9A3 640 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 SCN4BQ8IWT1 228 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 PTGR2Q8N8N7 351 aaPredicted RBP12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 RSPH1Q8WYR4 309 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 NSUN5Q96P11 429 aaKnown RBP12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 ZIC5Q96T25 663 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 SLX1AQ9BQ83 275 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 ERVK-6Q9BXR3 956 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 MFSD1Q9H3U5 465 aa12.49□□□□□ -0.41
PPP3CB-204ENST00000394829 SAC3D1A6NKF1 404 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 H3BNH8 94 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 ZFC3H1O60293 1989 aaKnown RBP12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 TMCC1O94876 653 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 CD1DP15813 335 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 CHRM3P20309 590 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 ACADVLP49748 655 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 NDST2P52849 883 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 CDH15P55291 814 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 CAPRIN1Q14444 709 aaKnown RBP12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 GEN1Q17RS7 908 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 MAP7D1Q3KQU3 841 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 TMEM259Q4ZIN3 620 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 NHSL2Q5HYW2 709 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 GDF6Q6KF10 455 aaPredicted RBP12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 BORAQ6PGQ7 559 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 HACD2Q6Y1H2 254 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 SPATA2LQ8IUW3 424 aaPredicted RBP12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 CLYBLQ8N0X4 340 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 PGBD5Q8N414 524 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 OR2T34Q8NGX1 318 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 OR2T3Q8NH03 318 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 TRMOQ9BU70 441 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 LIN28AQ9H9Z2 209 aaKnown RBP12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 MID1IP1Q9NPA3 183 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 AURKCQ9UQB9 309 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 FAM149AA5PLN7 773 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 UBXN8O00124 270 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 PIP5K1BO14986 540 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 LDB2O43679 373 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 PAPSS2O95340 614 aaPredicted RBP12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 ZNF23P17027 643 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 CAPN3P20807 821 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 OR4D1Q15615 310 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 FBXO48Q5FWF7 155 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 SPPL2CQ8IUH8 684 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 RIN3Q8TB24 985 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 GPATCH1Q9BRR8 931 aaKnown RBP12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 EFHD1Q9BUP0 239 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 SP110Q9HB58 689 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 VPS45Q9NRW7 570 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 MYRFQ9Y2G1 1151 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 HEMK1Q9Y5R4 338 aaPredicted RBP12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 A0A1B0GTL3 188 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 M0QZQ0 153 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 PDLIM1O00151 329 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 TRMUO75648 421 aaKnown RBP12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 CDK4P11802 303 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 TSPY1Q01534 308 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 SEMA3AQ14563 771 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 PFKFB4Q16877 469 aa12.48□□□□□ -0.41
PPP3CB-204ENST00000394829 UMODL1-AS1Q8N2C9 162 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms