RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 SLC1A5Q15758 541 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 DRICH1Q6PGQ1 229 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 ZNF765Q7L2R6 523 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 LYSMD3Q7Z3D4 306 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 PARGQ86W56 976 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 RASGEF1CQ8N431 466 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 ATL2Q8NHH9 583 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 AP2M1Q96CW1 435 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 RTP4Q96DX8 246 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 OSBPL9Q96SU4 736 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 NAP1L3Q99457 506 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 GORASP1Q9BQQ3 440 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 FICDQ9BVA6 458 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 ABCG8Q9H221 673 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 PKD2L2Q9NZM6 624 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 SHOC2Q9UQ13 582 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 OR1A2Q9Y585 309 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 PDE2AO00408 941 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 PSMD3O43242 534 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 AGTP01019 485 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 IFNB1P01574 187 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 CSF2P04141 144 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 FGF1P05230 155 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 EPHA8P29322 1005 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 SPINT3P49223 89 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 HNRNPKP61978 463 aaKnown RBP eCLIP18.96■□□□□ 0.631e-7■■■■■ 51.2
PDLIM7-204ENST00000393546 NFATC4Q14934 902 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 INAVAQ3KP66 663 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 ZNF542PQ5EBM4 170 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 TPRG1LQ5T0D9 272 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 RAET1GQ6H3X3 334 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 ENPP7Q6UWV6 458 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 MACC1Q6ZN28 852 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 RFLNAQ6ZTI6 216 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 DGLUCYQ7Z3D6 616 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 TMC3Q7Z5M5 1100 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 NAXDQ8IW45 347 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 RHBDD1Q8TEB9 315 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 SAP25Q8TEE9 199 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 TRABDQ9H4I3 376 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 HACD3Q9P035 362 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 CD84Q9UIB8 345 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 TTC7AQ9ULT0 858 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 SNX12Q9UMY4 172 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 ZNF711Q9Y462 761 aa18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 TDRD6O60522 2096 aaKnown RBP18.96■□□□□ 0.63
PDLIM7-204ENST00000393546 H3BM21 787 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 METTL18O95568 372 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 PYGLP06737 847 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 CEACAM1P13688 526 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 KELP23276 732 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 TEAD1P28347 426 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 ADRA1AP35348 466 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 GRK6P43250 576 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 CHRNA4P43681 627 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 GPR1P46091 355 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 KIAA1024LP59773 190 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 EIF2B5Q13144 721 aaKnown RBP18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 RANBP10Q6VN20 620 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 GATAD2AQ86YP4 633 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 CCDC89Q8N998 374 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 DEFB124Q8NES8 71 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 BTN2A2Q8WVV5 523 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 SCAMP4Q969E2 229 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 FUBP1Q96AE4 644 aaKnown RBP18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 MS4A14Q96JA4 679 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 WDR92Q96MX6 357 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 FAM83DQ9H4H8 585 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 WDR26Q9H7D7 661 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 PHPT1Q9NRX4 125 aaPredicted RBP18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 RAD18Q9NS91 495 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 SPO11Q9Y5K1 396 aa18.95■□□□□ 0.62
PDLIM7-204ENST00000393546 PCNX2A6NKB5 2137 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 K7ESM1 405 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 CES2O00748 559 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 PIAS2O75928 621 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 KCNK5O95279 499 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 NME1P15531 152 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 JUNDP17535 347 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 BLKP51451 505 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 NOVA1P51513 510 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 PPARDQ03181 441 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 FAXCQ5TGI0 409 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 GSTA5Q7RTV2 222 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 KLHDC8BQ8IXV7 354 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 PELI3Q8N2H9 469 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 PRELID2Q8N945 189 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 BLOC1S5Q8TDH9 187 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 COG1Q8WTW3 980 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 CAMK1GQ96NX5 476 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 TBL1YQ9BQ87 522 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 RIOK2Q9BVS4 552 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 TEX101Q9BY14 249 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 CDH19Q9H159 772 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 KCND1Q9NSA2 647 aa18.94■□□□□ 0.62
PDLIM7-204ENST00000393546 CNOT1A5YKK6 2376 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-204ENST00000393546 PGRMC1O00264 195 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-204ENST00000393546 SDC3O75056 442 aa18.93■□□□□ 0.62
PDLIM7-204ENST00000393546 SLC4A1P02730 911 aa18.93■□□□□ 0.62
PDLIM7-204ENST00000393546 TCP1P17987 556 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms