RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 SIGLEC10Q96LC7 697 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 DTNAQ9Y4J8 743 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 KDM1AO60341 852 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 ALPIP09923 528 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 PSMA4P25789 261 aaKnown RBP16.5■□□□□ 0.23
SNX9-201ENST00000392185 MSX2P35548 267 aaPredicted RBP16.5■□□□□ 0.23
SNX9-201ENST00000392185 ATP6V0D1P61421 351 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 USP46P62068 366 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 SIX1Q15475 284 aaPredicted RBP16.5■□□□□ 0.23
SNX9-201ENST00000392185 MSANTD2Q6P1R3 559 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 SLC39A5Q6ZMH5 540 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 CPNE9Q8IYJ1 553 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 FITM2Q8N6M3 262 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 GFM2Q969S9 779 aaKnown RBP16.5■□□□□ 0.23
SNX9-201ENST00000392185 FAM120BQ96EK7 910 aaKnown RBP16.5■□□□□ 0.23
SNX9-201ENST00000392185 MAGED4Q96JG8 741 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 TBCDQ9BTW9 1192 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 TRIM4Q9C037 500 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 PHACTR1Q9C0D0 580 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 MIEF1Q9NQG6 463 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 ADAMTS4O75173 837 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 ENTPD5O75356 428 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 ZNF23P17027 643 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 CACNA2D1P54289 1103 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 KRT72Q14CN4 511 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 CATSPER1Q8NEC5 780 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 PTCD2Q8WV60 388 aaKnown RBP16.5■□□□□ 0.23
SNX9-201ENST00000392185 OTULINQ96BN8 352 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 COPS7BQ9H9Q2 264 aaPredicted RBP16.5■□□□□ 0.23
SNX9-201ENST00000392185 FBXL21Q9UKT6 434 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 TRAF6Q9Y4K3 522 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 ASB3Q9Y575 518 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 AZIN1O14977 448 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 ULK1O75385 1050 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 NFATC1O95644 943 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 ZNF682O95780 498 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 MAPK1P28482 360 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 MAGEA11P43364 429 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 CUZD1Q86UP6 607 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 HEXDCQ8WVB3 486 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 SLC25A23Q9BV35 468 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 ZNF395Q9H8N7 513 aaPredicted RBP16.49■□□□□ 0.23
SNX9-201ENST00000392185 CCDC154A6NI56 674 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 COCHO43405 550 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 DGKGP49619 791 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 AP1S1P61966 158 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 FRG1Q14331 258 aaKnown RBP16.49■□□□□ 0.23
SNX9-201ENST00000392185 PPP2R2DQ66LE6 453 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 GPRIN3Q6ZVF9 776 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 COLGALT2Q8IYK4 626 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 SLC2A13Q96QE2 648 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 ARL8BQ9NVJ2 186 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 SNX5Q9Y5X3 404 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 CDK5RAP2Q96SN8 1893 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 TBC1D3DA0A087WVF3 549 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 TBC1D3IA0A087WXS9 549 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 TBC1D3EA0A087X179 549 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 TBC1D3KA0A087X1G2 549 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 TBC1D3FA6NER0 549 aaPredicted RBP16.49■□□□□ 0.23
SNX9-201ENST00000392185 TBC1D3LB9A6J9 549 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 ABLIM1O14639 778 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 SCAMP1O15126 338 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 IPO13O94829 963 aaKnown RBP16.49■□□□□ 0.23
SNX9-201ENST00000392185 PFKMP08237 780 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 TBC1D3HP0C7X1 549 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 HSPA1AP0DMV8 641 aaKnown RBP16.49■□□□□ 0.23
SNX9-201ENST00000392185 HSPA1BP0DMV9 641 aaKnown RBP16.49■□□□□ 0.23
SNX9-201ENST00000392185 DDX5P17844 614 aaKnown RBP16.49■□□□□ 0.23
SNX9-201ENST00000392185 ME2P23368 584 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 IRF9Q00978 393 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 CAP1Q01518 475 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 CHRNB3Q05901 458 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 PREPLQ4J6C6 727 aaPredicted RBP16.49■□□□□ 0.23
SNX9-201ENST00000392185 TBC1D3GQ6DHY5 549 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 TBC1D3CQ6IPX1 549 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 KIAA0408Q6ZU52 694 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 CAND1Q86VP6 1230 aaKnown RBP16.49■□□□□ 0.23
SNX9-201ENST00000392185 TBC1D3Q8IZP1 549 aaPredicted RBP16.49■□□□□ 0.23
SNX9-201ENST00000392185 PYDC1Q8WXC3 89 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 AP2M1Q96CW1 435 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 NRBF2Q96F24 287 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 ASB2Q96Q27 587 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 ADAM7Q9H2U9 754 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 FAM83DQ9H4H8 585 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 PSAT1Q9Y617 370 aa16.49■□□□□ 0.23
SNX9-201ENST00000392185 SLC7A4O43246 635 aa16.48■□□□□ 0.23
SNX9-201ENST00000392185 POP4O95707 220 aaKnown RBP16.48■□□□□ 0.23
SNX9-201ENST00000392185 WASHC5Q12768 1159 aa16.48■□□□□ 0.23
SNX9-201ENST00000392185 ZBTB6Q15916 424 aa16.48■□□□□ 0.23
SNX9-201ENST00000392185 CLEC6AQ6EIG7 209 aa16.48■□□□□ 0.23
SNX9-201ENST00000392185 C2orf73Q8N5S3 287 aaPredicted RBP16.48■□□□□ 0.23
SNX9-201ENST00000392185 ARFGAP1Q8N6T3 406 aa16.48■□□□□ 0.23
SNX9-201ENST00000392185 DCAKDQ8WVC6 231 aa16.48■□□□□ 0.23
SNX9-201ENST00000392185 RMND5AQ9H871 391 aa16.48■□□□□ 0.23
SNX9-201ENST00000392185 FAF1Q9UNN5 650 aaPredicted RBP16.48■□□□□ 0.23
SNX9-201ENST00000392185 ASF1AQ9Y294 204 aa16.48■□□□□ 0.23
SNX9-201ENST00000392185 ILVBLA1L0T0 632 aa16.48■□□□□ 0.23
SNX9-201ENST00000392185 NTRK1P04629 796 aa16.48■□□□□ 0.23
SNX9-201ENST00000392185 MAPK9P45984 424 aa16.48■□□□□ 0.23
SNX9-201ENST00000392185 TSNQ15631 228 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms