RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 HOXC4P09017 264 aaPredicted RBP11.78□□□□□ -0.52
SOD1-202ENST00000389995 GOLGA6DP0CG33 693 aa11.78□□□□□ -0.52
SOD1-202ENST00000389995 MYCLP1P12525 358 aaPredicted RBP11.78□□□□□ -0.52
SOD1-202ENST00000389995 ADCY8P40145 1251 aa11.78□□□□□ -0.52
SOD1-202ENST00000389995 HDAC4P56524 1084 aa11.78□□□□□ -0.52
SOD1-202ENST00000389995 ABHD18Q0P651 414 aa11.78□□□□□ -0.52
SOD1-202ENST00000389995 RAPGEF1Q13905 1077 aa11.78□□□□□ -0.52
SOD1-202ENST00000389995 PTPRRQ15256 657 aa11.78□□□□□ -0.52
SOD1-202ENST00000389995 CLPPQ16740 277 aaPredicted RBP11.78□□□□□ -0.52
SOD1-202ENST00000389995 TSR1Q2NL82 804 aaKnown RBP11.78□□□□□ -0.52
SOD1-202ENST00000389995 SRLQ86TD4 932 aa11.78□□□□□ -0.52
SOD1-202ENST00000389995 NOP9Q86U38 636 aaKnown RBP11.78□□□□□ -0.52
SOD1-202ENST00000389995 CCDC13Q8IYE1 715 aa11.78□□□□□ -0.52
SOD1-202ENST00000389995 TSEN2Q8NCE0 465 aaKnown RBP11.78□□□□□ -0.52
SOD1-202ENST00000389995 FNIP1Q8TF40 1166 aa11.78□□□□□ -0.52
SOD1-202ENST00000389995 FAM172AQ8WUF8 416 aa11.78□□□□□ -0.52
SOD1-202ENST00000389995 CELF6Q96J87 481 aaKnown RBP11.78□□□□□ -0.52
SOD1-202ENST00000389995 ZNF641Q96N77 438 aaPredicted RBP11.78□□□□□ -0.52
SOD1-202ENST00000389995 FRMD8Q9BZ67 464 aaPredicted RBP11.78□□□□□ -0.52
SOD1-202ENST00000389995 PDFQ9HBH1 243 aa11.78□□□□□ -0.52
SOD1-202ENST00000389995 GOLGA6AQ9NYA3 693 aa11.78□□□□□ -0.52
SOD1-202ENST00000389995 TLK1Q9UKI8 766 aa11.78□□□□□ -0.52
SOD1-202ENST00000389995 SETD2Q9BYW2 2564 aaPredicted RBP11.78□□□□□ -0.52
SOD1-202ENST00000389995 ADGRG4Q8IZF6 3080 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 A0A0U1RQS6 177 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 ZW10O43264 779 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 CREB3O43889 395 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 ZNF28P17035 718 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 SDC4P31431 198 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 DLSTP36957 453 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 PPP1R2P41236 205 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 ACTR1BP42025 376 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 STAT5AP42229 794 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 MAPK9P45984 424 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 ACTR1AP61163 376 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 NOMO3P69849 1222 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 SQSTM1Q13501 440 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 AFMIDQ63HM1 303 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 TCTN3Q6NUS6 607 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 DPY19L2P1Q6NXN4 242 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 CEACAM20Q6UY09 585 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 DPPA4Q7L190 304 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 EFCAB3Q8N7B9 438 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 CPT1CQ8TCG5 803 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 NCSTNQ92542 709 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 NUS1Q96E22 293 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 AHCYL2Q96HN2 611 aaKnown RBP11.77□□□□□ -0.53
SOD1-202ENST00000389995 COQ10AQ96MF6 247 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 TEFMQ96QE5 360 aaKnown RBP11.77□□□□□ -0.53
SOD1-202ENST00000389995 TEX101Q9BY14 249 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 ATP13A3Q9H7F0 1226 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 CASS4Q9NQ75 786 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 PHPT1Q9NRX4 125 aaPredicted RBP11.77□□□□□ -0.53
SOD1-202ENST00000389995 TRNAU1APQ9NX07 287 aaKnown RBP11.77□□□□□ -0.53
SOD1-202ENST00000389995 B4GALT6Q9UBX8 382 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 HOOK1Q9UJC3 728 aaKnown RBP11.77□□□□□ -0.53
SOD1-202ENST00000389995 TMEM98Q9Y2Y6 226 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 TMEM184BQ9Y519 407 aaPredicted RBP11.77□□□□□ -0.53
SOD1-202ENST00000389995 KCTD3Q9Y597 815 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 FHOD1Q9Y613 1164 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 RPS6KL1Q9Y6S9 549 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 SPTBP11277 2137 aa11.77□□□□□ -0.53
SOD1-202ENST00000389995 CCDC88CQ9P219 2028 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 CDC14CA4D256 554 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 CFAP69A5D8W1 941 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 C2CD4BA6NLJ0 364 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 PDE2AO00408 941 aaPredicted RBP11.76□□□□□ -0.53
SOD1-202ENST00000389995 KATNA1O75449 491 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 MAP3K6O95382 1288 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 DLGAP3O95886 979 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 TNFAIP3P21580 790 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 SERPINA4P29622 427 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 DCTP40126 519 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 ETV3P41162 512 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 COPB1P53618 953 aaKnown RBP11.76□□□□□ -0.53
SOD1-202ENST00000389995 BPIFB4P59827 614 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 CDK3Q00526 305 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 MC1RQ01726 317 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 NFATC2Q13469 925 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 EIF2S3LQ2VIR3 472 aaKnown RBP11.76□□□□□ -0.53
SOD1-202ENST00000389995 NADK2Q4G0N4 442 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 PRR30Q53SZ7 412 aaPredicted RBP11.76□□□□□ -0.53
SOD1-202ENST00000389995 SCYL2Q6P3W7 929 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 RFLNAQ6ZTI6 216 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 MARK2Q7KZI7 788 aaKnown RBP11.76□□□□□ -0.53
SOD1-202ENST00000389995 ARHGAP22Q7Z5H3 698 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 HSD11B1LQ7Z5J1 315 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 TRIM74Q86UV6 250 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 FAM114A1Q8IWE2 563 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 GALNT11Q8NCW6 608 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 SLC30A5Q8TAD4 765 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 SLC37A2Q8TED4 501 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 SLC20A1Q8WUM9 679 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 ECHDC3Q96DC8 303 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 TIGD1Q96MW7 591 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 TUBGCP5Q96RT8 1024 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 SLC38A3Q99624 504 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 C11orf70Q9BRQ4 267 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 EFHD1Q9BUP0 239 aa11.76□□□□□ -0.53
SOD1-202ENST00000389995 RETREG1Q9H6L5 497 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms