RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 AHCYL2Q96HN2 611 aaKnown RBP17.31■□□□□ 0.36
HMGN1-203ENST00000380748 TUBGCP5Q96RT8 1024 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 ZPBPQ9BS86 351 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 FBXO8Q9NRD0 319 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 PHPT1Q9NRX4 125 aaPredicted RBP17.31■□□□□ 0.36
HMGN1-203ENST00000380748 TNRC6AQ8NDV7 1962 aaKnown RBP17.31■□□□□ 0.36
HMGN1-203ENST00000380748 RFPL1O75677 317 aa17.3■□□□□ 0.36
HMGN1-203ENST00000380748 CYP11B1P15538 503 aa17.3■□□□□ 0.36
HMGN1-203ENST00000380748 EPHB2P29323 1055 aa17.3■□□□□ 0.36
HMGN1-203ENST00000380748 ACTR1BP42025 376 aa17.3■□□□□ 0.36
HMGN1-203ENST00000380748 POLD2P49005 469 aa17.3■□□□□ 0.36
HMGN1-203ENST00000380748 ACTR1AP61163 376 aa17.3■□□□□ 0.36
HMGN1-203ENST00000380748 PAK1Q13153 545 aa17.3■□□□□ 0.36
HMGN1-203ENST00000380748 GPT2Q8TD30 523 aa17.3■□□□□ 0.36
HMGN1-203ENST00000380748 CPA5Q8WXQ8 436 aa17.3■□□□□ 0.36
HMGN1-203ENST00000380748 NUS1Q96E22 293 aa17.3■□□□□ 0.36
HMGN1-203ENST00000380748 COQ10AQ96MF6 247 aa17.3■□□□□ 0.36
HMGN1-203ENST00000380748 TEX101Q9BY14 249 aa17.3■□□□□ 0.36
HMGN1-203ENST00000380748 PDFQ9HBH1 243 aa17.3■□□□□ 0.36
HMGN1-203ENST00000380748 TRBV23OR9-2A0A075B6M9 112 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 J3KR12 359 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 CLDN1O95832 211 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 SERPINA4P29622 427 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 SDC4P31431 198 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 DLSTP36957 453 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 HDAC4P56524 1084 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 YBEYP58557 167 aaPredicted RBP17.29■□□□□ 0.36
HMGN1-203ENST00000380748 BPIFB4P59827 614 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 PARP15Q460N3 678 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 NAA35Q5VZE5 725 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 MAMDC2Q7Z304 686 aaPredicted RBP17.29■□□□□ 0.36
HMGN1-203ENST00000380748 SRLQ86TD4 932 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 CREBRFQ8IUR6 639 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 ESX1Q8N693 406 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 OR10G6Q8NH81 332 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 JOSD2Q8TAC2 188 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 ECHDC3Q96DC8 303 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 SLC38A3Q99624 504 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 ATP13A3Q9H7F0 1226 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 CASS4Q9NQ75 786 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 HOOK1Q9UJC3 728 aaKnown RBP17.29■□□□□ 0.36
HMGN1-203ENST00000380748 CROTQ9UKG9 612 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 POLHQ9Y253 713 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 PCDHB3Q9Y5E6 796 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 OTOGQ6ZRI0 2925 aa17.29■□□□□ 0.36
HMGN1-203ENST00000380748 BIN1O00499 593 aa17.28■□□□□ 0.36
HMGN1-203ENST00000380748 DNAJB5O75953 348 aa17.28■□□□□ 0.36
HMGN1-203ENST00000380748 ZNF28P17035 718 aa17.28■□□□□ 0.36
HMGN1-203ENST00000380748 POU3F2P20265 443 aaPredicted RBP17.28■□□□□ 0.36
HMGN1-203ENST00000380748 TNFRSF8P28908 595 aa17.28■□□□□ 0.36
HMGN1-203ENST00000380748 PMS2P54278 862 aa17.28■□□□□ 0.36
HMGN1-203ENST00000380748 CDK3Q00526 305 aa17.28■□□□□ 0.36
HMGN1-203ENST00000380748 TICAM1Q8IUC6 712 aa17.28■□□□□ 0.36
HMGN1-203ENST00000380748 PAF1Q8N7H5 531 aa17.28■□□□□ 0.36
HMGN1-203ENST00000380748 TSEN2Q8NCE0 465 aaKnown RBP17.28■□□□□ 0.36
HMGN1-203ENST00000380748 MSANTD4Q8NCY6 345 aa17.28■□□□□ 0.36
HMGN1-203ENST00000380748 SLC37A2Q8TED4 501 aa17.28■□□□□ 0.36
HMGN1-203ENST00000380748 B4GALT6Q9UBX8 382 aa17.28■□□□□ 0.36
HMGN1-203ENST00000380748 SLC17A4Q9Y2C5 497 aa17.28■□□□□ 0.36
HMGN1-203ENST00000380748 MAP4K5Q9Y4K4 846 aa17.28■□□□□ 0.36
HMGN1-203ENST00000380748 OAS3Q9Y6K5 1087 aaKnown RBP17.28■□□□□ 0.36
HMGN1-203ENST00000380748 POLQO75417 2590 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 GTPBP10A4D1E9 387 aaKnown RBP17.27■□□□□ 0.36
HMGN1-203ENST00000380748 CDC14CA4D256 554 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 C2CD4BA6NLJ0 364 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 POLR1CO15160 346 aaPredicted RBP17.27■□□□□ 0.36
HMGN1-203ENST00000380748 MAP3K6O95382 1288 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 LSM8O95777 96 aaKnown RBP17.27■□□□□ 0.36
HMGN1-203ENST00000380748 DDAH2O95865 285 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 IVLP07476 585 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 ERCC5P28715 1186 aaPredicted RBP17.27■□□□□ 0.36
HMGN1-203ENST00000380748 FASLGP48023 281 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 NOMO3P69849 1222 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 PEX6Q13608 980 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 MAP7Q14244 749 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 NADK2Q4G0N4 442 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 SMYD5Q6GMV2 418 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 DOK6Q6PKX4 331 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 WDR74Q6RFH5 385 aaPredicted RBP17.27■□□□□ 0.36
HMGN1-203ENST00000380748 STRADAQ7RTN6 431 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 NOP9Q86U38 636 aaKnown RBP17.27■□□□□ 0.36
HMGN1-203ENST00000380748 UMODL1-AS1Q8N2C9 162 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 FAM172AQ8WUF8 416 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 NCSTNQ92542 709 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 CENPIQ92674 756 aaPredicted RBP17.27■□□□□ 0.36
HMGN1-203ENST00000380748 NSMCE3Q96MG7 304 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 TIGD1Q96MW7 591 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 ULBP3Q9BZM4 244 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 KLHL3Q9UH77 587 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.36
HMGN1-203ENST00000380748 GOLGA6CA6NDK9 693 aa17.26■□□□□ 0.35
HMGN1-203ENST00000380748 GOLGA6BA6NDN3 693 aa17.26■□□□□ 0.35
HMGN1-203ENST00000380748 CREB3O43889 395 aa17.26■□□□□ 0.35
HMGN1-203ENST00000380748 PRAMEF11O60813 436 aa17.26■□□□□ 0.35
HMGN1-203ENST00000380748 KATNA1O75449 491 aa17.26■□□□□ 0.35
HMGN1-203ENST00000380748 KRT38O76015 456 aa17.26■□□□□ 0.35
HMGN1-203ENST00000380748 EML2O95834 649 aa17.26■□□□□ 0.35
HMGN1-203ENST00000380748 MMEP08473 750 aa17.26■□□□□ 0.35
HMGN1-203ENST00000380748 GOLGA6DP0CG33 693 aa17.26■□□□□ 0.35
HMGN1-203ENST00000380748 PTPN9P43378 593 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms