RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 MN1Q10571 1320 aaPredicted RBP9.37□□□□□ -0.91
PTPRA-204ENST00000380393 AXIN1O15169 862 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 AKR7A2O43488 359 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 CALUO43852 315 aaPredicted RBP9.37□□□□□ -0.91
PTPRA-204ENST00000380393 TSC22D2O75157 780 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 TIPRLO75663 272 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 BMP1P13497 986 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 ERP29P30040 261 aaKnown RBP9.37□□□□□ -0.91
PTPRA-204ENST00000380393 GPC1P35052 558 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 PRELPP51888 382 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 PICALMQ13492 652 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 KNOP1Q1ED39 458 aaKnown RBP9.37□□□□□ -0.91
PTPRA-204ENST00000380393 C2CD6Q53TS8 623 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 CCNYL2Q5T2Q4 361 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 VWA5B1Q5TIE3 1220 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 LETMD1Q6P1Q0 360 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 EFL1Q7Z2Z2 1120 aaKnown RBP9.37□□□□□ -0.91
PTPRA-204ENST00000380393 SLC22A15Q8IZD6 547 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 VPS39Q96JC1 886 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 NUSAP1Q9BXS6 441 aaKnown RBP9.37□□□□□ -0.91
PTPRA-204ENST00000380393 ADAMTS10Q9H324 1103 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 KCTD10Q9H3F6 313 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 KLHL20Q9Y2M5 609 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 UBE4BO95155 1302 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 USP17L5A8MUK1 530 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 INHBAP08476 426 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 HMGCLP35914 325 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 AIF1P55008 147 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 PPIL2Q13356 520 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 ACOX1Q15067 660 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 XAF1Q6GPH4 301 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 DPY19L2P1Q6NXN4 242 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 PLCZ1Q86YW0 608 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 BEST2Q8NFU1 509 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 OR8H1Q8NGG4 311 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 ELMO1Q92556 727 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 SEPT8Q92599 483 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 NCLNQ969V3 563 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 HDHD5Q9BXW7 423 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 ENTPD7Q9NQZ7 604 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 TRPM5Q9NZQ8 1165 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 SIRPGQ9P1W8 387 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 C17orf113A0A1B0GUU1 675 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 TNFRSF21O75509 655 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 OR2B3O76000 313 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 RALBP11234 206 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 CCR10P46092 362 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 CCT3P49368 545 aaKnown RBP9.36□□□□□ -0.91
PTPRA-204ENST00000380393 IDH3AP50213 366 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 PSMC6P62333 389 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 TFAMQ00059 246 aaKnown RBP9.36□□□□□ -0.91
PTPRA-204ENST00000380393 ZNF273Q14593 569 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 CTF1Q16619 201 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 CA9Q16790 459 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 DDR2Q16832 855 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 SLC36A3Q495N2 470 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 RBM20Q5T481 1227 aaKnown RBP9.36□□□□□ -0.91
PTPRA-204ENST00000380393 PMF1Q6P1K2 205 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 TBC1D19Q8N5T2 526 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 NSUN6Q8TEA1 469 aaKnown RBP9.36□□□□□ -0.91
PTPRA-204ENST00000380393 CD101Q93033 1021 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 PTP4A1Q93096 173 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 YIPF5Q969M3 257 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 ELMO3Q96BJ8 720 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 TSGA13Q96PP4 275 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 ANO3Q9BYT9 981 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 ACSS3Q9H6R3 686 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 UBE2TQ9NPD8 197 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-204ENST00000380393 FBXO5Q9UKT4 447 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 AGO1Q9UL18 857 aaKnown RBP9.36□□□□□ -0.91
PTPRA-204ENST00000380393 BTBD3Q9Y2F9 522 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 MFHAS1Q9Y4C4 1052 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 ZNFX1Q9P2E3 1918 aaKnown RBP9.36□□□□□ -0.91
PTPRA-204ENST00000380393 HNRNPCL2B2RXH8 293 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 EML1O00423 815 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 BTN3A3O00478 584 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 PITPNM1O00562 1244 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 GATCO43716 136 aaKnown RBP9.36□□□□□ -0.91
PTPRA-204ENST00000380393 SNNO75324 88 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-204ENST00000380393 CCNE2O96020 404 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 KRT1P04264 644 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 SLC2A3P11169 496 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 MYL4P12829 197 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 ZBTB37Q5TC79 503 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 ZNF517Q6ZMY9 492 aaPredicted RBP9.36□□□□□ -0.91
PTPRA-204ENST00000380393 FRMD5Q7Z6J6 570 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 CLEC10AQ8IUN9 316 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 MFSD2AQ8NA29 543 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 PHF10Q8WUB8 498 aaKnown RBP9.36□□□□□ -0.91
PTPRA-204ENST00000380393 UFD1Q92890 307 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 SGTBQ96EQ0 304 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 BTN2A3PQ96KV6 586 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 LHX5Q9H2C1 402 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 WDR41Q9HAD4 459 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 PIH1D1Q9NWS0 290 aaKnown RBP9.36□□□□□ -0.91
PTPRA-204ENST00000380393 HPF1Q9NWY4 346 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 ING3Q9NXR8 418 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 ADA2Q9NZK5 511 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 CNOT6Q9ULM6 557 aaKnown RBP9.36□□□□□ -0.91
PTPRA-204ENST00000380393 ACOT8O14734 319 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms