RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 DTD2Q96FN9 168 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 ZNF599Q96NL3 588 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 NUDCD1Q96RS6 583 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 FRMD8Q9BZ67 464 aaPredicted RBP23.07■■□□□ 1.28
U2AF1-202ENST00000380276 STARD5Q9NSY2 213 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 LMBRD1Q9NUN5 540 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 TRNAU1APQ9NX07 287 aaKnown RBP23.07■■□□□ 1.28
U2AF1-202ENST00000380276 MYO1AQ9UBC5 1043 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 CNOT8Q9UFF9 292 aaKnown RBP23.07■■□□□ 1.28
U2AF1-202ENST00000380276 TMEM191CA6NGB0 347 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 HTRA2O43464 458 aaPredicted RBP23.06■■□□□ 1.28
U2AF1-202ENST00000380276 PPFIA2O75334 1257 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 CTPS1P17812 591 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 HSPA9P38646 679 aaKnown RBP23.06■■□□□ 1.28
U2AF1-202ENST00000380276 ACTR1BP42025 376 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 GPR1P46091 355 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 ZNF135P52742 658 aaPredicted RBP23.06■■□□□ 1.28
U2AF1-202ENST00000380276 ACTR1AP61163 376 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 CTBSQ01459 385 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 TRAF2Q12933 501 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 PEX6Q13608 980 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 DPYSQ14117 519 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 SMTNL2Q2TAL5 461 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 TMCO3Q6UWJ1 677 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 ZNF574Q6ZN55 896 aaPredicted RBP23.06■■□□□ 1.28
U2AF1-202ENST00000380276 Q6ZVL8 140 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 IRF2BP2Q7Z5L9 587 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 IL22RA1Q8N6P7 574 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 CCDC112Q8NEF3 446 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 PTCD2Q8WV60 388 aaKnown RBP23.06■■□□□ 1.28
U2AF1-202ENST00000380276 HTR3CQ8WXA8 447 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 HSPH1Q92598 858 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 TAAR9Q96RI9 348 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 NOD2Q9HC29 1040 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 CD84Q9UIB8 345 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 PHTF1Q9UMS5 762 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 PIEZO2Q9H5I5 2752 aa23.06■■□□□ 1.28
U2AF1-202ENST00000380276 NPIPB15A6NHN6 443 aaPredicted RBP23.05■■□□□ 1.28
U2AF1-202ENST00000380276 LRRC53A6NM62 1247 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 HGSO14964 777 aaPredicted RBP23.05■■□□□ 1.28
U2AF1-202ENST00000380276 LRCH4O75427 683 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 FUCA1P04066 466 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 ITGB6P18564 788 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 LHCGRP22888 699 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 AMPD1P23109 780 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 CD1CP29017 333 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 CSTF2P33240 577 aaKnown RBP eCLIP23.05■■□□□ 1.28
U2AF1-202ENST00000380276 ADCY8P40145 1251 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 PTPRRQ15256 657 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 CYP4V2Q6ZWL3 525 aaPredicted RBP23.05■■□□□ 1.28
U2AF1-202ENST00000380276 USP45Q70EL2 814 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 MARK2Q7KZI7 788 aaKnown RBP23.05■■□□□ 1.28
U2AF1-202ENST00000380276 ZNF438Q7Z4V0 828 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 TSPAN33Q86UF1 283 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 C17orf82Q86X59 251 aaPredicted RBP23.05■■□□□ 1.28
U2AF1-202ENST00000380276 FAM129CQ86XR2 697 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 PSTKQ8IV42 348 aaKnown RBP23.05■■□□□ 1.28
U2AF1-202ENST00000380276 PGBD5Q8N414 524 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 ATPAF2Q8N5M1 289 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 CDH19Q9H159 772 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 KCNK4Q9NYG8 393 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 PLEKHM1Q9Y4G2 1056 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 SCINQ9Y6U3 715 aa23.05■■□□□ 1.28
U2AF1-202ENST00000380276 ARHGEF17Q96PE2 2063 aaPredicted RBP23.04■■□□□ 1.28
U2AF1-202ENST00000380276 CYSRT1A8MQ03 144 aa23.04■■□□□ 1.28
U2AF1-202ENST00000380276 FTLP02792 175 aaPredicted RBP23.04■■□□□ 1.28
U2AF1-202ENST00000380276 FGF3P11487 239 aaPredicted RBP23.04■■□□□ 1.28
U2AF1-202ENST00000380276 HCAR3P49019 387 aa23.04■■□□□ 1.28
U2AF1-202ENST00000380276 CLPPQ16740 277 aaPredicted RBP23.04■■□□□ 1.28
U2AF1-202ENST00000380276 ARMC12Q5T9G4 340 aa23.04■■□□□ 1.28
U2AF1-202ENST00000380276 NRSN1Q8IZ57 195 aa23.04■■□□□ 1.28
U2AF1-202ENST00000380276 NAGSQ8N159 534 aa23.04■■□□□ 1.28
U2AF1-202ENST00000380276 ART4Q93070 314 aa23.04■■□□□ 1.28
U2AF1-202ENST00000380276 PMEPA1Q969W9 287 aa23.04■■□□□ 1.28
U2AF1-202ENST00000380276 AHCYL2Q96HN2 611 aaKnown RBP23.04■■□□□ 1.28
U2AF1-202ENST00000380276 ETNK2Q9NVF9 386 aa23.04■■□□□ 1.28
U2AF1-202ENST00000380276 TMEM98Q9Y2Y6 226 aa23.04■■□□□ 1.28
U2AF1-202ENST00000380276 TRBV23OR9-2A0A075B6M9 112 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 PPM1DO15297 605 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 IVLP07476 585 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 CR2P20023 1033 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 GPR3P46089 330 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 LIMK2P53671 638 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 ITKQ08881 620 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 NR1D2Q14995 579 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 CLCA4Q14CN2 919 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 AOPEPQ8N6M6 819 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 AGBL5Q8NDL9 886 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 FNIP1Q8TF40 1166 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 NKD1Q969G9 470 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 OR2M4Q96R27 311 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 MGME1Q9BQP7 344 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 SYT11Q9BT88 431 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 FUCA2Q9BTY2 467 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 B3GNT4Q9C0J1 378 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 HAUS4Q9H6D7 363 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.03■■□□□ 1.28
U2AF1-202ENST00000380276 SLC39A1Q9NY26 324 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 MYO18BQ8IUG5 2567 aa23.03■■□□□ 1.28
U2AF1-202ENST00000380276 AHCTF1Q8WYP5 2266 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms