RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 CD9P21926 228 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 PMLP29590 882 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 GCKP35557 465 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 KLF10Q13118 480 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 VWA5B1Q5TIE3 1220 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 GLT6D1Q7Z4J2 308 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 METTL3Q86U44 580 aaKnown RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 ULK2Q8IYT8 1036 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 CCNYL1Q8N7R7 359 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 RHEBL1Q8TAI7 183 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 L3HYPDHQ96EM0 354 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 CDKN2AIPNLQ96HQ2 116 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 ZFRQ96KR1 1074 aaKnown RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 C19orf43Q9BQ61 176 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 RTKNQ9BST9 563 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 AARSD1Q9BTE6 412 aaKnown RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 MARCH4Q9P2E8 410 aaPredicted RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 STOML1Q9UBI4 398 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 KCTD3Q9Y597 815 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 COMMD10Q9Y6G5 202 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 GFRA2O00451 464 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 TSPAN3O60637 253 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 GPR37L1O60883 481 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 TBL1XO60907 577 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 ENTPD5O75356 428 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 ZMPSTE24O75844 475 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 TMCC1O94876 653 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 PSMG1O95456 288 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 C1RP00736 705 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 THRAP10827 490 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 COX4I1P13073 169 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 GM2AP17900 193 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 GNAZP19086 355 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 IMPDH1P20839 514 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 LPOP22079 712 aaPredicted RBP10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 CPOXP36551 454 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 PPARGP37231 505 aaPredicted RBP10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 RGRP47804 291 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 SGSHP51688 502 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 GTF2A1P52655 376 aaPredicted RBP10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 CDKN2DP55273 166 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 AP1S1P61966 158 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 ARF5P84085 180 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 KPNB1Q14974 876 aaKnown RBP10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 LSM12Q3MHD2 195 aaKnown RBP10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 AARS2Q5JTZ9 985 aaKnown RBP10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 NCEH1Q6PIU2 408 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 Q6ZNB5 142 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 RAB44Q7Z6P3 723 aaPredicted RBP10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 DCAF4L2Q8NA75 395 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 KDM1BQ8NB78 822 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 OR13C4Q8NGS5 318 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 RP9Q8TA86 221 aaKnown RBP10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 MAPK15Q8TD08 544 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 MAELQ96JY0 434 aaKnown RBP10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 CCDC68Q9H2F9 335 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 TFB2MQ9H5Q4 396 aaKnown RBP10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 NDE1Q9NXR1 346 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 ZDHHC2Q9UIJ5 367 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 ARHGAP26Q9UNA1 814 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 RAI2Q9Y5P3 530 aa10.47□□□□□ -0.73
POLR2J3-201ENST00000379340 DENND4CQ5VZ89 1909 aa10.46□□□□□ -0.73
POLR2J3-201ENST00000379340 OR51F1A6NGY5 319 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 E9PBE3 544 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 H7C0S8 307 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 DCXO43602 365 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 CCNT2O60583 730 aaKnown RBP10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 KLHL41O60662 606 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 GJB3O75712 270 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 PRLP01236 227 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 PYGLP06737 847 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 CD1DP15813 335 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 MAPK8P45983 427 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 TTPAP49638 278 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 ATP6V0D1P61421 351 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 WDR5P61964 334 aaKnown RBP10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 PDAP1Q13442 181 aaKnown RBP10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 CCDC6Q16204 474 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 AAK1Q2M2I8 961 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 KHDC1Q4VXA5 237 aaKnown RBP10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 CMPK2Q5EBM0 449 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 ACSBG2Q5FVE4 666 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 GPR158Q5T848 1215 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 FRMD7Q6ZUT3 714 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 TMEM150AQ86TG1 271 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 CPXM2Q8N436 756 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 CARNMT1Q8N4J0 409 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 CEP70Q8NHQ1 597 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 ACTRT2Q8TDY3 377 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 MRPS31Q92665 395 aaKnown RBP10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 TMA16Q96EY4 203 aaKnown RBP10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 RSRC1Q96IZ7 334 aaKnown RBP10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 OR52B2Q96RD2 323 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 THTPAQ9BU02 230 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 ZNF385DQ9H6B1 395 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 IL21Q9HBE4 155 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 TAS2R13Q9NYV9 303 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 STX18Q9P2W9 335 aaKnown RBP10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 LHX3Q9UBR4 397 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 203.9 ms