RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 TUBGCP5Q96RT8 1024 aa17.34■□□□□ 0.37
THUMPD2-201ENST00000378727 PLCD4Q9BRC7 762 aa17.34■□□□□ 0.37
THUMPD2-201ENST00000378727 TRIM55Q9BYV6 548 aa17.34■□□□□ 0.37
THUMPD2-201ENST00000378727 GPR63Q9BZJ6 419 aa17.34■□□□□ 0.37
THUMPD2-201ENST00000378727 UNKQ9C0B0 810 aaKnown RBP17.34■□□□□ 0.37
THUMPD2-201ENST00000378727 KCNK13Q9HB14 408 aa17.34■□□□□ 0.37
THUMPD2-201ENST00000378727 INTS10Q9NVR2 710 aaKnown RBP17.34■□□□□ 0.37
THUMPD2-201ENST00000378727 DCTN4Q9UJW0 460 aa17.34■□□□□ 0.37
THUMPD2-201ENST00000378727 HOXC11O43248 304 aaPredicted RBP17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 LYPLA1O75608 230 aaPredicted RBP17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 SERPINE1P05121 402 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 APOA4P06727 396 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 DLDP09622 509 aaKnown RBP17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 POLR2EP19388 210 aaKnown RBP17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 FDXRP22570 491 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 PMLP29590 882 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 ARRB2P32121 409 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 HNF1BP35680 557 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 ITGA9Q13797 1035 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 FAM45BPQ6NSW5 357 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 TMEM207Q6UWW9 146 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 PIM3Q86V86 326 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 CHST14Q8NCH0 376 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 PPP1R14CQ8TAE6 165 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 FAM45AQ8TCE6 357 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 HEXDCQ8WVB3 486 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 LPGAT1Q92604 370 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 TSPAN17Q96FV3 270 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 TSNARE1Q96NA8 513 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 CPEB1Q9BZB8 566 aaKnown RBP17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 KDM4CQ9H3R0 1056 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 FAM96AQ9H5X1 160 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 THAP1Q9NVV9 213 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 CORO1CQ9ULV4 474 aaPredicted RBP17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 FNDC3AQ9Y2H6 1198 aaKnown RBP17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 USH1CQ9Y6N9 552 aa17.33■□□□□ 0.37
THUMPD2-201ENST00000378727 CAPN8A6NHC0 703 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 OTOL1A6NHN0 477 aaPredicted RBP17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 CCDC85CA6NKD9 419 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 RALBP11234 206 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 HYAL1Q12794 435 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 CSHL1Q14406 222 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 SYCE2Q6PIF2 218 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 ZYG11AQ6WRX3 759 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 TMEM184AQ6ZMB5 413 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 TBC1D1Q86TI0 1168 aaPredicted RBP17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 FITM2Q8N6M3 262 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 OR2A12Q8NGT7 310 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 ANKRD49Q8WVL7 239 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 SCYL1Q96KG9 808 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 UBXN10Q96LJ8 280 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 SUV39H2Q9H5I1 410 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 ZDHHC6Q9H6R6 413 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 GPAMQ9HCL2 828 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 XPR1Q9UBH6 696 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 PKP3Q9Y446 797 aa17.33■□□□□ 0.36
THUMPD2-201ENST00000378727 ZNF106Q9H2Y7 1883 aaKnown RBP17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 POP4O95707 220 aaKnown RBP17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 ADH1CP00326 375 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 FCARP24071 287 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 DGKGP49619 791 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 MESP2Q0VG99 397 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 TSNAXIP1Q2TAA8 658 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 GAB4Q2WGN9 574 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 NAPRTQ6XQN6 538 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 PAF1Q8N7H5 531 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 TTC8Q8TAM2 541 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 RDH11Q8TC12 318 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 ZNF398Q8TD17 642 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 FRS2Q8WU20 508 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 SCG3Q8WXD2 468 aaKnown RBP17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 TCF12Q99081 682 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 AARSD1Q9BTE6 412 aaKnown RBP17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 EBF3Q9H4W6 596 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 ZFYVE1Q9HBF4 777 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 OXSMQ9NWU1 459 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 KIF26AQ9ULI4 1882 aaPredicted RBP17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 DOCK8Q8NF50 2099 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 C1orf232A0A0U1RR37 186 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 HEPACAM2A8MVW5 462 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 GPR39O43194 453 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 CLDN7O95471 211 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 MYL2P10916 166 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 GRK2P25098 689 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 SLC1A6P48664 564 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 ILF2Q12905 390 aaKnown RBP17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 PTPRNQ16849 979 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 LACTB2Q53H82 288 aaPredicted RBP17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 ETFBKMTQ8IXQ9 262 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 SORT1Q99523 831 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 GDE1Q9NZC3 331 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 MED16Q9Y2X0 877 aa17.32■□□□□ 0.36
THUMPD2-201ENST00000378727 A0A0G2JND7 137 aa17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 NPIPB15A6NHN6 443 aaPredicted RBP17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 TTC34A8MYJ7 566 aa17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 WASH3PC4AMC7 463 aa17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 GAPDHSO14556 408 aaPredicted RBP17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 HGSO14964 777 aaPredicted RBP17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 TULP3O75386 442 aa17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 UGT2B4P06133 528 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms