RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 WASP42768 502 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 SLC25A3Q00325 362 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 DNAJC14Q6Y2X3 702 aaPredicted RBP14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 CAND1Q86VP6 1230 aaKnown RBP14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 FAM126BQ8IXS8 530 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 CMTM8Q8IZV2 173 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 CXorf40AQ8TE69 158 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 FAM162AQ96A26 154 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 GATA5Q9BWX5 397 aaPredicted RBP14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 SSU72Q9NP77 194 aaKnown RBP14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 SORCS3Q9UPU3 1222 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 DPPA5A6NC42 116 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 TMEM114B3SHH9 223 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 FFAR3O14843 346 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 INPPL1O15357 1258 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 GPR42O15529 346 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 PRAMEF1O95521 474 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 CYP11A1P05108 521 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 MPSTP25325 297 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 CST5P28325 142 aaPredicted RBP14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 ECHS1P30084 290 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 SOAT1P35610 550 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 UBAP2LQ14157 1087 aaKnown RBP14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 CBX2Q14781 532 aaPredicted RBP14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 PGS1Q32NB8 556 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 ARL13AQ5H913 290 aaPredicted RBP14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 ATAT1Q5SQI0 421 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 FAM9CQ8IZT9 166 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 MIER2Q8N344 545 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 ACDQ96AP0 544 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 NMUR2Q9GZQ4 415 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 ZNHIT2Q9UHR6 403 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 CROTQ9UKG9 612 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 BTRCQ9Y297 605 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 C5orf58C9J3I9 102 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 SLC1A2P43004 574 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 FBXO48Q5FWF7 155 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 CERS6Q6ZMG9 384 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 FSTL5Q8N475 847 aaPredicted RBP14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 FEM1CQ96JP0 617 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 SLC25A23Q9BV35 468 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 TBC1D30Q9Y2I9 924 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 ARL5AQ9Y689 179 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 EPB42P16452 691 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 MAPK1P28482 360 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 PKNOX1P55347 436 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 RIPOR1Q6ZS17 1223 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 CLEC4FQ8N1N0 589 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 PCDH20Q8N6Y1 951 aaKnown RBP14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 LINC01465Q8N7H1 131 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 ZMIZ2Q8NF64 920 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 OR8D1Q8WZ84 308 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 INPP5DQ92835 1189 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 CNBD2Q96M20 576 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 COMMD8Q9NX08 183 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 FNIP2Q9P278 1114 aa14.18□□□□□ -0.14
SHROOM1-203ENST00000378679 ECM29Q5VYK3 1845 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 BRWD3Q6RI45 1802 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 CCDC162PA2VCL2 907 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 IPO13O94829 963 aaKnown RBP14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 NFATC1O95644 943 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 POP4O95707 220 aaKnown RBP14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 RFC2P35250 354 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 SELENOMQ8WWX9 145 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 KATNBL1Q9H079 304 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 BRD9Q9H8M2 597 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 DUS2Q9NX74 493 aaKnown RBP14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 ETAA1Q9NY74 926 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 PER2O15055 1255 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 PRKCGP05129 697 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 EEF1DP29692 281 aaKnown RBP14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 PIK3CGP48736 1102 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 FRG1Q14331 258 aaKnown RBP14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 TCEA2Q15560 299 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 CLNKQ7Z7G1 428 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 MTFMTQ96DP5 389 aaKnown RBP14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 SNX13Q9Y5W8 968 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 EVPLQ92817 2033 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 FAM159BA6NKW6 160 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 PRR5-ARHGAP8B1AHC4 643 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 AZIN1O14977 448 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 DCLK1O15075 740 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 COCHO43405 550 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 MLYCDO95822 493 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 ARHGAP8P85298 464 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 ABRQ12979 859 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 GPM6BQ13491 265 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 RFTN1Q14699 578 aaPredicted RBP14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 CLYBLQ8N0X4 340 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 HHIPL1Q96JK4 782 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 ZNF599Q96NL3 588 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 KIF17Q9P2E2 1029 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 SLC2A6Q9UGQ3 507 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 TRAF6Q9Y4K3 522 aa14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 URB1O60287 2271 aaKnown RBP14.17□□□□□ -0.14
SHROOM1-203ENST00000378679 MAGEA13PA6NCF6 341 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 PGM3O95394 542 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 HSPA1AP0DMV8 641 aaKnown RBP14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 HSPA1BP0DMV9 641 aaKnown RBP14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 HOXD8P13378 290 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms