RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 IGKV6-21A0A0C4DH24 114 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 PMPCBO75439 489 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 SIX3O95343 332 aaPredicted RBP15.87■□□□□ 0.13
CKAP4-201ENST00000378026 LINC00032P0C843 101 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 ARNTP27540 789 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 GSSP48637 474 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 ADARB1P78563 741 aaKnown RBP15.87■□□□□ 0.13
CKAP4-201ENST00000378026 LIPEQ05469 1076 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 DMPKQ09013 629 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 PSMD5Q16401 504 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 MEP1AQ16819 746 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 THOC7Q6I9Y2 204 aaKnown RBP15.87■□□□□ 0.13
CKAP4-201ENST00000378026 ZMAT2Q96NC0 199 aaKnown RBP15.87■□□□□ 0.13
CKAP4-201ENST00000378026 FICDQ9BVA6 458 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 KIFC1Q9BW19 673 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 NDEL1Q9GZM8 345 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 HMG20AQ9NP66 347 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 MTRRQ9UBK8 725 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 FBXO5Q9UKT4 447 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 B3GNT3Q9Y2A9 372 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 COL11A1P12107 1806 aaPredicted RBP15.87■□□□□ 0.13
CKAP4-201ENST00000378026 TANC1Q9C0D5 1861 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 PIP5K1BO14986 540 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 PFDN6O15212 129 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 HTR1BP28222 390 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 DNAJB13P59910 316 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 PLIN5Q00G26 463 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 PHKG1Q16816 387 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 HACD2Q6Y1H2 254 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 ARHGAP36Q6ZRI8 547 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 PDZD4Q76G19 769 aaPredicted RBP15.87■□□□□ 0.13
CKAP4-201ENST00000378026 COLGALT2Q8IYK4 626 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 IL12RB2Q99665 862 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 GSTO2Q9H4Y5 243 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 ZNF229Q9UJW7 825 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 BAG5Q9UL15 447 aa15.87■□□□□ 0.13
CKAP4-201ENST00000378026 CCL22O00626 93 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 TPD52L2O43399 206 aaKnown RBP15.86■□□□□ 0.13
CKAP4-201ENST00000378026 BEST1O76090 585 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 TCF3P15923 654 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 TKTP29401 623 aaKnown RBP15.86■□□□□ 0.13
CKAP4-201ENST00000378026 IST1P53990 364 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 BNIP2Q12982 314 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 PCID2Q5JVF3 399 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 PRR23BQ6ZRT6 265 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 SPARTQ8N0X7 666 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 MIER2Q8N344 545 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 SPATA33Q96N06 139 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 GPR20Q99678 358 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 TMEM98Q9Y2Y6 226 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 TTC24A2A3L6 582 aaPredicted RBP15.86■□□□□ 0.13
CKAP4-201ENST00000378026 DFFAO00273 331 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 ABCB7O75027 752 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 INMTO95050 263 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 CYP2C8P10632 490 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 CYP2C9P11712 490 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 DIO3P55073 304 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 AGAP9Q5VTM2 703 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 ANKRD34AQ69YU3 496 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 GTF2IRD2BQ6EKJ0 949 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 USP51Q70EK9 711 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 GTF2IRD2Q86UP8 949 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 RALGPS2Q86X27 583 aaPredicted RBP15.86■□□□□ 0.13
CKAP4-201ENST00000378026 SDCCAG3Q96C92 435 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 TPK1Q9H3S4 243 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 GPN2Q9H9Y4 310 aaPredicted RBP15.86■□□□□ 0.13
CKAP4-201ENST00000378026 MID1IP1Q9NPA3 183 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 ABCD2Q9UBJ2 740 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 DNAJC15Q9Y5T4 150 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 H0Y858 1186 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 PSMD11O00231 422 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 NOBOXO60393 691 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 SLC4A1P02730 911 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 HSD17B1P14061 328 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 HGFP14210 728 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 AGXTP21549 392 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 ADRA1BP35368 520 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 KPNA2P52292 529 aaKnown RBP15.86■□□□□ 0.13
CKAP4-201ENST00000378026 SH3BP2P78314 561 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 ECT2LQ008S8 904 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 INAQ16352 499 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 PCSK7Q16549 785 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 GPR158Q5T848 1215 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 OR52K2Q8NGK3 314 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 SH3RF2Q8TEC5 729 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 SLC22A17Q8WUG5 538 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 STON2Q8WXE9 905 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 GJD4Q96KN9 370 aaPredicted RBP15.86■□□□□ 0.13
CKAP4-201ENST00000378026 TEKT5Q96M29 485 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 EPS8L2Q9H6S3 715 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 MYOZ2Q9NPC6 264 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 TLR9Q9NR96 1032 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 INTS10Q9NVR2 710 aaKnown RBP15.86■□□□□ 0.13
CKAP4-201ENST00000378026 SNTG2Q9NY99 539 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 ATP11BQ9Y2G3 1177 aa15.86■□□□□ 0.13
CKAP4-201ENST00000378026 A0A087X1B8 175 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 SOWAHBA6NEL2 793 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 ERI2A8K979 691 aaKnown RBP15.85■□□□□ 0.13
CKAP4-201ENST00000378026 GPIP06744 558 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 FCGR1AP12314 374 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms