RNA–Protein interactions for RNA: ENST00000377399.2

SPSB1-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-203ENST00000377399 TBC1D3DA0A087WVF3 549 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 TBC1D3IA0A087WXS9 549 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 TBC1D3EA0A087X179 549 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 TBC1D3KA0A087X1G2 549 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 CCDC151A5D8V7 595 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 TBC1D3FA6NER0 549 aaPredicted RBP19.17■□□□□ 0.66
SPSB1-203ENST00000377399 MROH6A6NGR9 719 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 TBC1D3LB9A6J9 549 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 MMP20O60882 483 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 USP1O94782 785 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 SEMA4FO95754 770 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 TBC1D3HP0C7X1 549 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 SP9P0CG40 484 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 C6P13671 934 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 CD6P30203 668 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 HOXA6P31267 233 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 HADHAP40939 763 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 PMS2P54278 862 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 RPS21P63220 83 aaKnown RBP19.17■□□□□ 0.66
SPSB1-203ENST00000377399 USP39Q53GS9 565 aaKnown RBP19.17■□□□□ 0.66
SPSB1-203ENST00000377399 SPANXN3Q5MJ09 141 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 ZDHHC20Q5W0Z9 365 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 TBC1D3GQ6DHY5 549 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 TBC1D3CQ6IPX1 549 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 CAPN12Q6ZSI9 719 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 RELL1Q8IUW5 271 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 IGDCC3Q8IVU1 814 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 TBC1D3Q8IZP1 549 aaPredicted RBP19.17■□□□□ 0.66
SPSB1-203ENST00000377399 OR13C4Q8NGS5 318 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 OR2T34Q8NGX1 318 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 AENQ8WTP8 325 aaKnown RBP19.17■□□□□ 0.66
SPSB1-203ENST00000377399 DNAJC1Q96KC8 554 aaKnown RBP19.17■□□□□ 0.66
SPSB1-203ENST00000377399 CDC42EP4Q9H3Q1 356 aaKnown RBP19.17■□□□□ 0.66
SPSB1-203ENST00000377399 BPIFA1Q9NP55 256 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 NLE1Q9NVX2 485 aaPredicted RBP19.17■□□□□ 0.66
SPSB1-203ENST00000377399 IL17CQ9P0M4 197 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 KCTD3Q9Y597 815 aa19.17■□□□□ 0.66
SPSB1-203ENST00000377399 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.17■□□□□ 0.66
SPSB1-203ENST00000377399 RNGTTO60942 597 aaKnown RBP19.16■□□□□ 0.66
SPSB1-203ENST00000377399 NDUFS2O75306 463 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 RPP40O75818 363 aaKnown RBP19.16■□□□□ 0.66
SPSB1-203ENST00000377399 TM7SF2O76062 418 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 NMBRP28336 390 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 ACSL1P33121 698 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 PRAMEP78395 509 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 TMPRSS15P98073 1019 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 PTSQ03393 145 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 CSTF1Q05048 431 aaKnown RBP19.16■□□□□ 0.66
SPSB1-203ENST00000377399 CRYMQ14894 314 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 ANKRD20A4Q4UJ75 823 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 NEK5Q6P3R8 708 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 CES3Q6UWW8 571 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 TRMT10CQ7L0Y3 403 aaKnown RBP19.16■□□□□ 0.66
SPSB1-203ENST00000377399 HSD11B1LQ7Z5J1 315 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 HORMAD1Q86X24 394 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.16■□□□□ 0.66
SPSB1-203ENST00000377399 RLN3Q8WXF3 142 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 MFSD3Q96ES6 412 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 TOE1Q96GM8 510 aaKnown RBP19.16■□□□□ 0.66
SPSB1-203ENST00000377399 C19orf43Q9BQ61 176 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 WDR83Q9BRX9 315 aaKnown RBP19.16■□□□□ 0.66
SPSB1-203ENST00000377399 VPS37BQ9H9H4 285 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 NINJ2Q9NZG7 142 aa19.16■□□□□ 0.66
SPSB1-203ENST00000377399 FNDC3AQ9Y2H6 1198 aaKnown RBP19.16■□□□□ 0.66
SPSB1-203ENST00000377399 IGHV1OR15-9A0A0B4J2B8 117 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 CCDC163A0A0D9SF12 145 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 RGSL1A5PLK6 1076 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 WNT9AO14904 365 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 SPAG6O75602 509 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 GSTA2P09210 222 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 TSHRP16473 764 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 PHBP35232 272 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 SPAM1P38567 509 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 SPINT3P49223 89 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 STEAP4Q687X5 459 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 ESRP1Q6NXG1 681 aaKnown RBP19.15■□□□□ 0.66
SPSB1-203ENST00000377399 TSSK4Q6SA08 328 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 UNC5AQ6ZN44 842 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 TMEM135Q86UB9 458 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 RAVER1Q8IY67 606 aaKnown RBP19.15■□□□□ 0.66
SPSB1-203ENST00000377399 NRSN1Q8IZ57 195 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 GSDMBQ8TAX9 411 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 CAVIN3Q969G5 261 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 NUS1Q96E22 293 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 ZNF778Q96MU6 729 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 TRIM56Q9BRZ2 755 aaKnown RBP19.15■□□□□ 0.66
SPSB1-203ENST00000377399 C1QTNF7Q9BXJ2 289 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 CDH19Q9H159 772 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 TREX1Q9NSU2 369 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 KCTD5Q9NXV2 234 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 WSB2Q9NYS7 404 aaPredicted RBP19.15■□□□□ 0.66
SPSB1-203ENST00000377399 SLC2A6Q9UGQ3 507 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 COQ6Q9Y2Z9 468 aa19.15■□□□□ 0.66
SPSB1-203ENST00000377399 SCN8AQ9UQD0 1980 aa19.14■□□□□ 0.65
SPSB1-203ENST00000377399 A0A1W2PQU0 124 aa19.14■□□□□ 0.65
SPSB1-203ENST00000377399 IGLON5A6NGN9 336 aa19.14■□□□□ 0.65
SPSB1-203ENST00000377399 GOLGA8CPA6NN73 597 aa19.14■□□□□ 0.65
SPSB1-203ENST00000377399 RECQL5O94762 991 aaPredicted RBP19.14■□□□□ 0.65
SPSB1-203ENST00000377399 ACSL3O95573 720 aa19.14■□□□□ 0.65
SPSB1-203ENST00000377399 ETV3P41162 512 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms