RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 ZNF597Q96LX8 424 aa18.12■□□□□ 0.49
SF1-203ENST00000377387 MRPL40Q9NQ50 206 aaKnown RBP18.12■□□□□ 0.49
SF1-203ENST00000377387 DMTF1Q9Y222 760 aa18.12■□□□□ 0.49
SF1-203ENST00000377387 H3BMM5 538 aa18.12■□□□□ 0.49
SF1-203ENST00000377387 HTRA2O43464 458 aaPredicted RBP18.12■□□□□ 0.49
SF1-203ENST00000377387 CAPN3P20807 821 aa18.12■□□□□ 0.49
SF1-203ENST00000377387 GPX3P22352 226 aa18.12■□□□□ 0.49
SF1-203ENST00000377387 APOFQ13790 326 aa18.12■□□□□ 0.49
SF1-203ENST00000377387 MS4A13Q5J8X5 152 aa18.12■□□□□ 0.49
SF1-203ENST00000377387 CLYBLQ8N0X4 340 aa18.12■□□□□ 0.49
SF1-203ENST00000377387 TWIST2Q8WVJ9 160 aa18.12■□□□□ 0.49
SF1-203ENST00000377387 SMIM14Q96QK8 99 aa18.12■□□□□ 0.49
SF1-203ENST00000377387 EFHD1Q9BUP0 239 aa18.12■□□□□ 0.49
SF1-203ENST00000377387 GMIPQ9P107 970 aa18.12■□□□□ 0.49
SF1-203ENST00000377387 TSR3Q9UJK0 312 aaKnown RBP18.12■□□□□ 0.49
SF1-203ENST00000377387 TCRBV3S1A0A5B6 114 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 HGFP14210 728 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 HUNKP57058 714 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 HABP4Q5JVS0 413 aaKnown RBP18.11■□□□□ 0.49
SF1-203ENST00000377387 CCDC117Q8IWD4 279 aaPredicted RBP18.11■□□□□ 0.49
SF1-203ENST00000377387 NUP93Q8N1F7 819 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 CBR4Q8N4T8 237 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 DNAJB14Q8TBM8 379 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 SERPINB11Q96P15 392 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 PRG3Q9Y2Y8 225 aaPredicted RBP18.11■□□□□ 0.49
SF1-203ENST00000377387 CCDC162PA2VCL2 907 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 ANGPT2O15123 496 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 LDB2O43679 373 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 GLP2RO95838 553 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 HSPA8P11142 646 aaKnown RBP18.11■□□□□ 0.49
SF1-203ENST00000377387 CD1DP15813 335 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 HERVK_113P63132 956 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 UGT3A2Q3SY77 523 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 AFMIDQ63HM1 303 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 C2orf69Q8N8R5 385 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 PCYOX1LQ8NBM8 494 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 GABPB2Q8TAK5 448 aaPredicted RBP18.11■□□□□ 0.49
SF1-203ENST00000377387 DDI1Q8WTU0 396 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 VPS33AQ96AX1 596 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 RPRD1AQ96P16 312 aaPredicted RBP18.11■□□□□ 0.49
SF1-203ENST00000377387 TRIM62Q9BVG3 475 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 OSBPL11Q9BXB4 747 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 ERVK-6Q9BXR3 956 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 ZYG11BQ9C0D3 744 aa18.11■□□□□ 0.49
SF1-203ENST00000377387 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.11■□□□□ 0.498e-10■■■□□ 18.4
SF1-203ENST00000377387 IQCA1LA6NCM1 817 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 GPR182O15218 404 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 CD3EAPO15446 510 aaKnown RBP18.1■□□□□ 0.49
SF1-203ENST00000377387 SLC7A4O43246 635 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 B4GALT3O60512 393 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 CRCPO75575 148 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 MTHFD1P11586 935 aaKnown RBP18.1■□□□□ 0.49
SF1-203ENST00000377387 NDST2P52849 883 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 DIO3P55073 304 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 CFAP52Q8N1V2 620 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 OR2T34Q8NGX1 318 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 OR2T3Q8NH03 318 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 RRAGCQ9HB90 399 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 ARNT2Q9HBZ2 717 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 OLAHQ9NV23 265 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 POLR3BQ9NW08 1133 aaPredicted RBP18.1■□□□□ 0.49
SF1-203ENST00000377387 CEPT1Q9Y6K0 416 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 RNF103-CHMP3A0A140T963 221 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 KLHL33A6NCF5 533 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 SUPT3HB4E1H0 165 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 MUSKO15146 869 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 SUPT3HO75486 399 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 H6PDO95479 791 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 NCK1P16333 377 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 FBXL22Q6P050 247 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 ZNF786Q8N393 782 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 MYEOVQ96EZ4 313 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 RMND5BQ96G75 393 aaPredicted RBP18.1■□□□□ 0.49
SF1-203ENST00000377387 CYP2S1Q96SQ9 504 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 MFSD1Q9H3U5 465 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 TUBB1Q9H4B7 451 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 MYRFQ9Y2G1 1151 aa18.1■□□□□ 0.49
SF1-203ENST00000377387 AZIN1O14977 448 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 CDH2P19022 906 aaPredicted RBP18.09■□□□□ 0.49
SF1-203ENST00000377387 FMO4P31512 558 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 TRAP1Q12931 704 aaKnown RBP18.09■□□□□ 0.49
SF1-203ENST00000377387 TRIM32Q13049 653 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 TUSC3Q13454 348 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 POLD3Q15054 466 aaPredicted RBP18.09■□□□□ 0.49
SF1-203ENST00000377387 ZNF280BQ86YH2 543 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 ATAD1Q8NBU5 361 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 EXOC2Q96KP1 924 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 VPS45Q9NRW7 570 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 ATXN10Q9UBB4 475 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 HSFX1Q9UBD0 423 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 SARDHQ9UL12 918 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 BAIAP3O94812 1187 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 CAPNS1P04632 268 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 CTGFP29279 349 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 MAPRE1Q15691 268 aaKnown RBP18.09■□□□□ 0.49
SF1-203ENST00000377387 CST9Q5W186 159 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 FAM45BPQ6NSW5 357 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 SLC15A3Q8IY34 581 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 ARRDC2Q8TBH0 407 aa18.09■□□□□ 0.49
SF1-203ENST00000377387 FAM45AQ8TCE6 357 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms