RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 MAGEA1P43355 309 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 ABCG1P45844 678 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 CDK3Q00526 305 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 DPTQ07507 201 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 AP1B1Q10567 949 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 ILF3Q12906 894 aaKnown RBP eCLIP17.13■□□□□ 0.33
USP11-202ENST00000377078 ISXQ2M1V0 245 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 COL28A1Q2UY09 1125 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 TBC1D25Q3MII6 688 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 PERM1Q5SV97 790 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 SLC9A4Q6AI14 798 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 CRTC1Q6UUV9 634 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 ZNF765Q7L2R6 523 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 TSPAN33Q86UF1 283 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 RFX6Q8HWS3 928 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 RAVER1Q8IY67 606 aaKnown RBP17.13■□□□□ 0.33
USP11-202ENST00000377078 CBARPQ8N350 705 aaPredicted RBP17.13■□□□□ 0.33
USP11-202ENST00000377078 SNIP1Q8TAD8 396 aaKnown RBP17.13■□□□□ 0.33
USP11-202ENST00000377078 AP2M1Q96CW1 435 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 LGR4Q9BXB1 951 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 GSDMCQ9BYG8 508 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 TMEM168Q9H0V1 697 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 DPEP2Q9H4A9 486 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 POLR1BQ9H9Y6 1135 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 MRPL40Q9NQ50 206 aaKnown RBP17.13■□□□□ 0.33
USP11-202ENST00000377078 CHKBQ9Y259 395 aa17.13■□□□□ 0.33
USP11-202ENST00000377078 ZFYVE26Q68DK2 2539 aa17.12■□□□□ 0.33
USP11-202ENST00000377078 CAPN8A6NHC0 703 aa17.12■□□□□ 0.33
USP11-202ENST00000377078 TMX2-CTNND1H3BSU7 103 aa17.12■□□□□ 0.33
USP11-202ENST00000377078 IPO7O95373 1038 aaKnown RBP17.12■□□□□ 0.33
USP11-202ENST00000377078 CYLC1P35663 651 aaPredicted RBP17.12■□□□□ 0.33
USP11-202ENST00000377078 LSSP48449 732 aa17.12■□□□□ 0.33
USP11-202ENST00000377078 IFI35P80217 286 aaPredicted RBP17.12■□□□□ 0.33
USP11-202ENST00000377078 SLC10A2Q12908 348 aaPredicted RBP17.12■□□□□ 0.33
USP11-202ENST00000377078 TFDP2Q14188 446 aa17.12■□□□□ 0.33
USP11-202ENST00000377078 CCDC170Q8IYT3 715 aa17.12■□□□□ 0.33
USP11-202ENST00000377078 NRSN1Q8IZ57 195 aa17.12■□□□□ 0.33
USP11-202ENST00000377078 PLD5Q8N7P1 536 aa17.12■□□□□ 0.33
USP11-202ENST00000377078 LPCAT1Q8NF37 534 aa17.12■□□□□ 0.33
USP11-202ENST00000377078 ARRDC2Q8TBH0 407 aa17.12■□□□□ 0.33
USP11-202ENST00000377078 CCDC74AQ96AQ1 378 aa17.12■□□□□ 0.33
USP11-202ENST00000377078 ZNF578Q96N58 590 aaPredicted RBP17.12■□□□□ 0.33
USP11-202ENST00000377078 LGMNQ99538 433 aa17.12■□□□□ 0.33
USP11-202ENST00000377078 TRNAU1APQ9NX07 287 aaKnown RBP17.12■□□□□ 0.33
USP11-202ENST00000377078 B4DGG1 531 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 ZW10O43264 779 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 PSTPIP1O43586 416 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 MPOP05164 745 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 RBMS1P29558 406 aaKnown RBP17.11■□□□□ 0.33
USP11-202ENST00000377078 CD86P42081 329 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 GNPDA1P46926 289 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 NR2C2P49116 596 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 BIRC2Q13490 618 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 ADAMTSL4Q6UY14 1074 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 TECPR1Q7Z6L1 1165 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 NLRP8Q86W28 1048 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 CCHCR1Q8TD31 782 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 RNF25Q96BH1 459 aaPredicted RBP17.11■□□□□ 0.33
USP11-202ENST00000377078 GFM1Q96RP9 751 aaKnown RBP17.11■□□□□ 0.33
USP11-202ENST00000377078 FRMD8Q9BZ67 464 aaPredicted RBP17.11■□□□□ 0.33
USP11-202ENST00000377078 CDH19Q9H159 772 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 SUDS3Q9H7L9 328 aaPredicted RBP17.11■□□□□ 0.33
USP11-202ENST00000377078 THSD1Q9NS62 852 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 SEPT10Q9P0V9 454 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
USP11-202ENST00000377078 ITPR1Q14643 2758 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 ASXL3Q9C0F0 2248 aa17.11■□□□□ 0.33
USP11-202ENST00000377078 LRP4O75096 1905 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 C1orf232A0A0U1RR37 186 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 C3orf70A6NLC5 250 aaPredicted RBP17.1■□□□□ 0.33
USP11-202ENST00000377078 DXOO77932 396 aaKnown RBP17.1■□□□□ 0.33
USP11-202ENST00000377078 PNLIPP16233 465 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 GLB1P16278 677 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 COMTP21964 271 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 EIF2S3P41091 472 aaKnown RBP17.1■□□□□ 0.33
USP11-202ENST00000377078 STC1P52823 247 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 HADHBP55084 474 aaKnown RBP17.1■□□□□ 0.33
USP11-202ENST00000377078 PCBP4P57723 403 aaKnown RBP17.1■□□□□ 0.33
USP11-202ENST00000377078 ERVPABLB-1P60509 514 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 DYNLT1P63172 113 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 PTSQ03393 145 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 NIPAL4Q0D2K0 466 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 C14orf28Q4W4Y0 310 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 CERCAMQ5T4B2 595 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 OGFOD3Q6PK18 319 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 NT5DC3Q86UY8 548 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 PELI3Q8N2H9 469 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 TC2NQ8N9U0 490 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 ZNF248Q8NDW4 579 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 GPR156Q8NFN8 814 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 LRRN4Q8WUT4 740 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 ATXN7L3BQ96GX2 97 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 MLPHQ9BV36 600 aaPredicted RBP17.1■□□□□ 0.33
USP11-202ENST00000377078 STRADBQ9C0K7 418 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 ABCG8Q9H221 673 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 PKD2L2Q9NZM6 624 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 CD84Q9UIB8 345 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 RALYQ9UKM9 306 aaKnown RBP17.1■□□□□ 0.33
USP11-202ENST00000377078 SLC17A4Q9Y2C5 497 aa17.1■□□□□ 0.33
USP11-202ENST00000377078 RGSL1A5PLK6 1076 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms