RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ARRDC2Q8TBH0 407 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 ZUFSPQ96AP4 578 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 ARMC1Q9NVT9 282 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 POLR3BQ9NW08 1133 aaPredicted RBP14.55□□□□□ -0.08
MSH5-201ENST00000375703 MYRFQ9Y2G1 1151 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 PTGDR2Q9Y5Y4 395 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 CEPT1Q9Y6K0 416 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 LRRC14BA6NHZ5 514 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 UBXN8O00124 270 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 KPNA6O60684 536 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 GOT2P00505 430 aaKnown RBP14.54□□□□□ -0.08
MSH5-201ENST00000375703 ATXN1LP0C7T5 689 aaKnown RBP14.54□□□□□ -0.08
MSH5-201ENST00000375703 BMP2P12643 396 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 TYMPP19971 482 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 PAX3P23760 479 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 THPOP40225 353 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 MGAT3Q09327 533 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 DDR2Q16832 855 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 LRRC23Q53EV4 343 aaPredicted RBP14.54□□□□□ -0.08
MSH5-201ENST00000375703 PPP4R4Q6NUP7 873 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 DDIASQ8IXT1 998 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 NUP93Q8N1F7 819 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 MIER2Q8N344 545 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 BLOC1S5Q8TDH9 187 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 TWIST2Q8WVJ9 160 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 UROC1Q96N76 676 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 ADAM2Q99965 735 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 GPATCH1Q9BRR8 931 aaKnown RBP14.54□□□□□ -0.08
MSH5-201ENST00000375703 OLAHQ9NV23 265 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 GIMAP2Q9UG22 337 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 SCML2Q9UQR0 700 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 ARL5AQ9Y689 179 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 DOCK3Q8IZD9 2030 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 H3BNH8 94 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 NME4O00746 187 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 AZIN1O14977 448 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 PIP5K1BO14986 540 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 TMCC1O94876 653 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 AKR1A1P14550 325 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 ATP6V1B2P21281 511 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 FOXA1P55317 472 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 GRB7Q14451 532 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 OR4D1Q15615 310 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 IRAK1BP1Q5VVH5 260 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 MRNIPQ6NTE8 343 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 MSANTD2Q6P1R3 559 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 SERINC5Q86VE9 423 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 ALDH16A1Q8IZ83 802 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 GRIN3AQ8TCU5 1115 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 EZH1Q92800 747 aaPredicted RBP14.54□□□□□ -0.08
MSH5-201ENST00000375703 PNPLA3Q9NST1 481 aa14.54□□□□□ -0.08
MSH5-201ENST00000375703 CCM2LQ9NUG4 571 aaPredicted RBP14.54□□□□□ -0.08
MSH5-201ENST00000375703 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.54□□□□□ -0.08
MSH5-201ENST00000375703 DNAH12Q6ZR08 3092 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 GLTPD2A6NH11 291 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 SOCS2O14508 198 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 ANGPT2O15123 496 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 ZNF23P17027 643 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 CDH2P19022 906 aaPredicted RBP14.53□□□□□ -0.08
MSH5-201ENST00000375703 TIAL1Q01085 375 aaKnown RBP eCLIP14.53□□□□□ -0.082e-9■■■■□ 19.7
MSH5-201ENST00000375703 EFEMP1Q12805 493 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 POLD3Q15054 466 aaPredicted RBP14.53□□□□□ -0.08
MSH5-201ENST00000375703 RPS6KA2Q15349 733 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 ERMP1Q7Z2K6 904 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 SPPL2CQ8IUH8 684 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 B4GALNT2Q8NHY0 566 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 FAM110BQ8TC76 370 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 IGSF8Q969P0 613 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 TADA1Q96BN2 335 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 ZNF512Q96ME7 567 aaPredicted RBP14.53□□□□□ -0.08
MSH5-201ENST00000375703 TCF12Q99081 682 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 SEMA3CQ99985 751 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 AURKCQ9UQB9 309 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 CCDC162PA2VCL2 907 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 IQCA1LA6NCM1 817 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 PLOD2O00469 737 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 DUSP11O75319 330 aaKnown RBP14.53□□□□□ -0.08
MSH5-201ENST00000375703 PCSK6P29122 969 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 GPR15P49685 360 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 PABPC1LQ4VXU2 614 aaKnown RBP14.53□□□□□ -0.08
MSH5-201ENST00000375703 NHSL2Q5HYW2 709 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 TBCELQ5QJ74 424 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 PRMT9Q6P2P2 845 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 SLC15A3Q8IY34 581 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 MINDY1Q8N5J2 469 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 ATP6V0D2Q8N8Y2 350 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 TRPC4APQ8TEL6 797 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 TUBGCP3Q96CW5 907 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 RMND5BQ96G75 393 aaPredicted RBP14.53□□□□□ -0.08
MSH5-201ENST00000375703 NSUN5Q96P11 429 aaKnown RBP14.53□□□□□ -0.08
MSH5-201ENST00000375703 DUS2Q9NX74 493 aaKnown RBP14.53□□□□□ -0.08
MSH5-201ENST00000375703 EGFL7Q9UHF1 273 aa14.53□□□□□ -0.08
MSH5-201ENST00000375703 C9JVG2 144 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 HNRNPRO43390 633 aaKnown RBP14.52□□□□□ -0.08
MSH5-201ENST00000375703 GJB3O75712 270 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 LINC00032P0C843 101 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 MTHFD2P13995 350 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 GFAPP14136 432 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 IL10P22301 178 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 SLC5A2P31639 672 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms