RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 TAL1P17542 331 aaPredicted RBP9.05□□□□□ -0.96
UBR4-201ENST00000375218 PFKLP17858 780 aa9.05□□□□□ -0.96
UBR4-201ENST00000375218 EPORP19235 508 aa9.05□□□□□ -0.96
UBR4-201ENST00000375218 GPR4P46093 362 aa9.05□□□□□ -0.96
UBR4-201ENST00000375218 NKX2-5P52952 324 aaPredicted RBP9.05□□□□□ -0.96
UBR4-201ENST00000375218 LCP2Q13094 533 aa9.05□□□□□ -0.96
UBR4-201ENST00000375218 DUSP28Q4G0W2 176 aa9.05□□□□□ -0.96
UBR4-201ENST00000375218 SPOPLQ6IQ16 392 aa9.05□□□□□ -0.96
UBR4-201ENST00000375218 EXOC3L1Q86VI1 746 aa9.05□□□□□ -0.96
UBR4-201ENST00000375218 FOXP4Q8IVH2 680 aaPredicted RBP9.05□□□□□ -0.96
UBR4-201ENST00000375218 ZZZ3Q8IYH5 903 aa9.05□□□□□ -0.96
UBR4-201ENST00000375218 KRT78Q8N1N4 520 aa9.05□□□□□ -0.96
UBR4-201ENST00000375218 RAD51AP1Q96B01 352 aa9.05□□□□□ -0.96
UBR4-201ENST00000375218 ZNF514Q96K75 400 aaPredicted RBP9.05□□□□□ -0.96
UBR4-201ENST00000375218 DNAI1Q9UI46 699 aa9.05□□□□□ -0.96
UBR4-201ENST00000375218 NDUFS3O75489 264 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 OR8G3PP0DMU2 310 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 FLOT2Q14254 428 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 PABPC1LQ4VXU2 614 aaKnown RBP9.04□□□□□ -0.96
UBR4-201ENST00000375218 METTL21CQ5VZV1 264 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 REC114Q7Z4M0 266 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 PLCZ1Q86YW0 608 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 KLHL7Q8IXQ5 586 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 ATP8B4Q8TF62 1192 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 HMCESQ96FZ2 354 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 C5orf34Q96MH7 638 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 ZNF395Q9H8N7 513 aaPredicted RBP9.04□□□□□ -0.96
UBR4-201ENST00000375218 ETNK1Q9HBU6 452 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 SLC39A2Q9NP94 309 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 GMEB2Q9UKD1 530 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 MAN2B2Q9Y2E5 1009 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 AP4B1Q9Y6B7 739 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 TCRBV16S1A1N1A0A5B0 115 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 H3BML4 177 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 SLC16A6O15403 523 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 MBP02144 154 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 MYBL1P10243 752 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 PTPN6P29350 595 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 SCTRP47872 440 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 AGBL2Q5U5Z8 902 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 ZDHHC20Q5W0Z9 365 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 NUDT18Q6ZVK8 323 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 KCTD9Q7L273 389 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 ZNF397Q8NF99 534 aaPredicted RBP9.04□□□□□ -0.96
UBR4-201ENST00000375218 SLC24A4Q8NFF2 622 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 CMASQ8NFW8 434 aaPredicted RBP9.04□□□□□ -0.96
UBR4-201ENST00000375218 ZNF473Q8WTR7 871 aaKnown RBP9.04□□□□□ -0.96
UBR4-201ENST00000375218 ANKRD36BP1Q96IX9 119 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 SERINC1Q9NRX5 453 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 CHRNA9Q9UGM1 479 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 CIDEBQ9UHD4 219 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 STXBP5LQ9Y2K9 1186 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 NOC2LQ9Y3T9 749 aaKnown RBP9.04□□□□□ -0.96
UBR4-201ENST00000375218 FAM32AQ9Y421 112 aaKnown RBP9.04□□□□□ -0.96
UBR4-201ENST00000375218 CSADQ9Y600 493 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 A0A1B0GTQ1 180 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 OR6C70A6NIJ9 312 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 SUPT3HB4E1H0 165 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 H3BM21 787 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 TOMM70O94826 608 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 RFC2P35250 354 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 HIRAP54198 1017 aaPredicted RBP9.04□□□□□ -0.96
UBR4-201ENST00000375218 ERVK-9P63128 1117 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 NKX3-2P78367 333 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 CDC20Q12834 499 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 UGT3A2Q3SY77 523 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 BCL7AQ4VC05 210 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 ZNF628Q5EBL2 1059 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 TDRD10Q5VZ19 366 aaKnown RBP9.04□□□□□ -0.96
UBR4-201ENST00000375218 PLA2G4DQ86XP0 818 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 ARMC8Q8IUR7 673 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 HERC6Q8IVU3 1022 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 LRRN4CLQ8ND94 238 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 BHLHE23Q8NDY6 225 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 TRPV3Q8NET8 790 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 AARSD1Q9BTE6 412 aaKnown RBP9.04□□□□□ -0.96
UBR4-201ENST00000375218 CPVLQ9H3G5 476 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 MTMR4Q9NYA4 1195 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 IGSF9Q9P2J2 1179 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 TSPAN16Q9UKR8 245 aa9.04□□□□□ -0.96
UBR4-201ENST00000375218 PLEKHA8P1O95397 391 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 VNN2O95498 520 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 TP53P04637 393 aaPredicted RBP9.03□□□□□ -0.96
UBR4-201ENST00000375218 GAAP10253 952 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 BRAFP15056 766 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 PAFAH1B1P43034 410 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 PIK3CGP48736 1102 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 WLSQ5T9L3 541 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 GARNL3Q5VVW2 1013 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 CYB5R2Q6BCY4 276 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 KLHL17Q6TDP4 642 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 POGLUT1Q8NBL1 392 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 AKAP1Q92667 903 aaKnown RBP eCLIP9.03□□□□□ -0.96
UBR4-201ENST00000375218 ANKRD27Q96NW4 1050 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 TPPP3Q9BW30 176 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 CPNE7Q9UBL6 633 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 OGDHLQ9ULD0 1010 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 CLDN16Q9Y5I7 305 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 HRH3Q9Y5N1 445 aa9.03□□□□□ -0.96
UBR4-201ENST00000375218 DOCK1Q14185 1865 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms