RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 POLHQ9Y253 713 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 TNFSF13BQ9Y275 285 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 DRG1Q9Y295 367 aaKnown RBP4.95□□□□□ -1.62
USP48-202ENST00000374730 R3HDM2Q9Y2K5 976 aaKnown RBP4.95□□□□□ -1.62
USP48-202ENST00000374730 CEP83Q9Y592 693 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 ENTPD2Q9Y5L3 495 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 hCG_1818297A0A087WSY0 165 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 ASB14A6NK59 587 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 F2RL2O00254 374 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 O00370 1275 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 DNALI1O14645 258 aaPredicted RBP4.94□□□□□ -1.62
USP48-202ENST00000374730 TOR1BO14657 336 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 MED7O43513 233 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 LIASO43766 372 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 TJP3O95049 919 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 C22orf31O95567 290 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 TTC4O95801 387 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 CHEK2O96017 543 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 WEE2P0C1S8 567 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 MCF2P10911 925 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 CHN1P15882 459 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 WT1P19544 449 aaPredicted RBP4.94□□□□□ -1.62
USP48-202ENST00000374730 DRD4P21917 467 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 GATA3P23771 443 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 TMOD1P28289 359 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 NF2P35240 595 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 CHKAP35790 457 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 GRIA3P42263 894 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 MAPK10P53779 464 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 RPL7AP62424 266 aaKnown RBP4.94□□□□□ -1.62
USP48-202ENST00000374730 MC2RQ01718 297 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 OGDHQ02218 1023 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 TNFAIP2Q03169 654 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 ARHGAP1Q07960 439 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 SNX1Q13596 522 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 PRKG1Q13976 671 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 GBX1Q14549 363 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 KCTD2Q14681 263 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 OASLQ15646 514 aaKnown RBP4.94□□□□□ -1.62
USP48-202ENST00000374730 TAZQ16635 292 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 KYAT1Q16773 422 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 LY6KQ17RY6 165 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 HSDL1Q3SXM5 330 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 CD300EQ496F6 205 aaPredicted RBP4.94□□□□□ -1.62
USP48-202ENST00000374730 MINDY4Q4G0A6 757 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 C2CD6Q53TS8 623 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 UBAP2Q5T6F2 1119 aaKnown RBP4.94□□□□□ -1.62
USP48-202ENST00000374730 ATF7IP2Q5U623 682 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 IZUMO3Q5VZ72 239 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 KAZNQ674X7 775 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 HIBCHQ6NVY1 386 aaPredicted RBP4.94□□□□□ -1.62
USP48-202ENST00000374730 TAPT1Q6NXT6 567 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 DCUN1D2Q6PH85 259 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 PEG10Q86TG7 708 aaKnown RBP4.94□□□□□ -1.62
USP48-202ENST00000374730 CACNA2D3Q8IZS8 1091 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 MIER2Q8N344 545 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 NME8Q8N427 588 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 LRRC71Q8N4P6 559 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 ZCCHC9Q8N567 271 aaKnown RBP4.94□□□□□ -1.62
USP48-202ENST00000374730 TTC39CQ8N584 583 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 WDTC1Q8N5D0 677 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 ALLCQ8N6M5 410 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 LINC01465Q8N7H1 131 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 PJA1Q8NG27 643 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 ATG4AQ8WYN0 398 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 CDCA5Q96FF9 252 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 CHMP6Q96FZ7 201 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 FBXL20Q96IG2 436 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 CCDC114Q96M63 670 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 SPATA33Q96N06 139 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 TTC25Q96NG3 672 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 SCLT1Q96NL6 688 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 ZNF317Q96PQ6 595 aaPredicted RBP4.94□□□□□ -1.62
USP48-202ENST00000374730 TRIB1Q96RU8 372 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 SMOQ99835 787 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 SELENOSQ9BQE4 189 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 TCHPQ9BT92 498 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 RABEP2Q9H5N1 569 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 ASB7Q9H672 318 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 ACTR5Q9H9F9 607 aaPredicted RBP4.94□□□□□ -1.62
USP48-202ENST00000374730 RPF1Q9H9Y2 349 aaKnown RBP4.94□□□□□ -1.62
USP48-202ENST00000374730 CYP3A43Q9HB55 503 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 TXNRD2Q9NNW7 524 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 PPANQ9NQ55 473 aaKnown RBP4.94□□□□□ -1.62
USP48-202ENST00000374730 EURLQ9NYK6 297 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 ERAP1Q9NZ08 941 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 NINJ2Q9NZG7 142 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 CFAP97Q9P2B7 532 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 WDR35Q9P2L0 1181 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 ANAPC5Q9UJX4 755 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 SCN1AP35498 2009 aa4.94□□□□□ -1.62
USP48-202ENST00000374730 SIGLEC16A6NMB1 481 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 E9PLN8 166 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 INO80B-WBP1J3KQ70 363 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 SLC16A6O15403 523 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 MAGEB2O15479 319 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 CDH16O75309 829 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 DDNO94850 711 aaPredicted RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 ACSL3O95573 720 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 LGALS2P05162 132 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms