RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 GSTT1P30711 240 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 DSC1Q08554 894 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 ADGRE1Q14246 886 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 TRIP4Q15650 581 aaPredicted RBP17.04■□□□□ 0.32
RXRB-201ENST00000374680 FUT11Q495W5 492 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 KLHDC8BQ8IXV7 354 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 SCML4Q8N228 414 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 C19orf60Q96EN9 201 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 PRPF18Q99633 342 aaKnown RBP17.04■□□□□ 0.32
RXRB-201ENST00000374680 SLC30A3Q99726 388 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 TRIM4Q9C037 500 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 MFSD1Q9H3U5 465 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 ARNT2Q9HBZ2 717 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 CATSPERZQ9NTU4 200 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 SPATS2LQ9NUQ6 558 aaKnown RBP17.04■□□□□ 0.32
RXRB-201ENST00000374680 F5H5T6 163 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 TIPRLO75663 272 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 SRP72O76094 671 aaKnown RBP17.04■□□□□ 0.32
RXRB-201ENST00000374680 ALDH2P05091 517 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 SERPINF2P08697 491 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 CD1DP15813 335 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 ITGB6P18564 788 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 RPL10P27635 214 aaKnown RBP17.04■□□□□ 0.32
RXRB-201ENST00000374680 TIAL1Q01085 375 aaKnown RBP eCLIP17.04■□□□□ 0.32
RXRB-201ENST00000374680 SEMG2Q02383 582 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 MTX3Q5HYI7 312 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 OGFRL1Q5TC84 451 aaPredicted RBP17.04■□□□□ 0.32
RXRB-201ENST00000374680 MAP3K21Q5TCX8 1036 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 SETD3Q86TU7 594 aaPredicted RBP17.04■□□□□ 0.32
RXRB-201ENST00000374680 CDKN2AIPNLQ96HQ2 116 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 CIB1Q99828 191 aa17.04■□□□□ 0.32
RXRB-201ENST00000374680 NOL11Q9H8H0 719 aaKnown RBP17.04■□□□□ 0.32
RXRB-201ENST00000374680 MRM3Q9HC36 420 aaKnown RBP17.04■□□□□ 0.32
RXRB-201ENST00000374680 ACOT8O14734 319 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 DIO3P55073 304 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 IRF5Q13568 498 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 MAP7D1Q3KQU3 841 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 LIN52Q52LA3 116 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 BEND5Q7L4P6 421 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 RETREG3Q86VR2 466 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 PELI3Q8N2H9 469 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 AFAP1L2Q8N4X5 818 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 CDK15Q96Q40 435 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 ATP13A1Q9HD20 1204 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 RIMS3Q9UJD0 308 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 MIA3Q5JRA6 1907 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 NRP2O60462 931 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 MT-ND1P03886 318 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 EEF1DP29692 281 aaKnown RBP17.03■□□□□ 0.32
RXRB-201ENST00000374680 GRIA3P42263 894 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 SLC11A1P49279 550 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 CHN2P52757 468 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 DNAJB13P59910 316 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 STX5Q13190 355 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 PTPRNQ16849 979 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 CNPY1Q3B7I2 92 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 MRNIPQ6NTE8 343 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 FUNDC1Q8IVP5 155 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 MYO1HQ8N1T3 1032 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 WBP2Q969T9 261 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 VPS33AQ96AX1 596 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 MAELQ96JY0 434 aaKnown RBP17.03■□□□□ 0.32
RXRB-201ENST00000374680 C8orf48Q96LL4 319 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 GPR21Q99679 349 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 C1orf50Q9BV19 199 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 CCDC68Q9H2F9 335 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 COQ10BQ9H8M1 238 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 POLR3BQ9NW08 1133 aaPredicted RBP17.03■□□□□ 0.32
RXRB-201ENST00000374680 RNF112Q9ULX5 631 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 SCN4AP35499 1836 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 ARHGEF37A1IGU5 675 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 TRIM38O00635 465 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 NIPSNAP2O75323 286 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 BCAS2O75934 225 aaPredicted RBP17.03■□□□□ 0.32
RXRB-201ENST00000374680 STX1BP61266 288 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 IL10RBQ08334 325 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 CCSAPQ6IQ19 270 aaPredicted RBP17.03■□□□□ 0.32
RXRB-201ENST00000374680 GRIP2Q9C0E4 1043 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 UPF3AQ9H1J1 476 aaKnown RBP17.03■□□□□ 0.32
RXRB-201ENST00000374680 AP4S1Q9Y587 144 aa17.03■□□□□ 0.32
RXRB-201ENST00000374680 ZNF236Q9UL36 1845 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 A0A0J9YYE9 177 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 LOC285095A0A1B0GVY8 99 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 NPEPPSL1A6NEC2 478 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 CA12O43570 354 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 SNAP91O60641 907 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 CLASP2O75122 1294 aaKnown RBP17.02■□□□□ 0.32
RXRB-201ENST00000374680 NDUFS3O75489 264 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 VNN2O95498 520 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 HGFP14210 728 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 LRP8Q14114 963 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 TRIM25Q14258 630 aaKnown RBP17.02■□□□□ 0.32
RXRB-201ENST00000374680 ZRANB3Q5FWF4 1079 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 GLT6D1Q7Z4J2 308 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 RNF180Q86T96 592 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 PIANPQ8IYJ0 282 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 DNAJB14Q8TBM8 379 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 GRIN3AQ8TCU5 1115 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 TWIST2Q8WVJ9 160 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 MEAF6Q9HAF1 191 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms