RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 DUS2Q9NX74 493 aaKnown RBP15.68■□□□□ 0.1
HDAC8-209ENST00000373589 MSRAQ9UJ68 235 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 SLC12A4Q9UP95 1085 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 A0A0G2JND7 137 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 CAPN8A6NHC0 703 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 HOXC11O43248 304 aaPredicted RBP15.68■□□□□ 0.1
HDAC8-209ENST00000373589 TRIM13O60858 407 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 DCTN3O75935 186 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 UBOX5O94941 541 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 LTA4HP09960 611 aaKnown RBP15.68■□□□□ 0.1
HDAC8-209ENST00000373589 MC4RP32245 332 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 VIPR2P41587 438 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 KPNA2P52292 529 aaKnown RBP15.68■□□□□ 0.1
HDAC8-209ENST00000373589 ARFIP2P53365 341 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 ABCE1P61221 599 aaKnown RBP15.68■□□□□ 0.1
HDAC8-209ENST00000373589 RAB30Q15771 203 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 FAM83EQ2M2I3 478 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 FAM78AQ5JUQ0 283 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 PLPP6Q8IY26 295 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 PIANPQ8IYJ0 282 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 RYBPQ8N488 228 aaPredicted RBP15.68■□□□□ 0.1
HDAC8-209ENST00000373589 NAT16Q8N8M0 369 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 ANKRD49Q8WVL7 239 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 SCYL1Q96KG9 808 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 ASB16Q96NS5 453 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 LYSMD1Q96S90 227 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 SORT1Q99523 831 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 MRPL57Q9BQC6 102 aaKnown RBP15.68■□□□□ 0.1
HDAC8-209ENST00000373589 GPR63Q9BZJ6 419 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 MRPL46Q9H2W6 279 aaKnown RBP15.68■□□□□ 0.1
HDAC8-209ENST00000373589 ACTR5Q9H9F9 607 aaPredicted RBP15.68■□□□□ 0.1
HDAC8-209ENST00000373589 POPDC3Q9HBV1 291 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 XPR1Q9UBH6 696 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 PPIL1Q9Y3C6 166 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 PKP3Q9Y446 797 aa15.68■□□□□ 0.1
HDAC8-209ENST00000373589 H2AFYO75367 372 aaKnown RBP15.67■□□□□ 0.1
HDAC8-209ENST00000373589 LYPLA1O75608 230 aaPredicted RBP15.67■□□□□ 0.1
HDAC8-209ENST00000373589 POP4O95707 220 aaKnown RBP15.67■□□□□ 0.1
HDAC8-209ENST00000373589 CISD3P0C7P0 127 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 FSHRP23945 695 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 HNF1BP35680 557 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 SCTRP47872 440 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 CDKN1CP49918 316 aaPredicted RBP15.67■□□□□ 0.1
HDAC8-209ENST00000373589 CCNHP51946 323 aaPredicted RBP15.67■□□□□ 0.1
HDAC8-209ENST00000373589 PRKAA2P54646 552 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 BNIP1Q12981 228 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 CSHL1Q14406 222 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 GEN1Q17RS7 908 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 HSF5Q4G112 596 aaPredicted RBP15.67■□□□□ 0.1
HDAC8-209ENST00000373589 AGAP9Q5VTM2 703 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 PSAPL1Q6NUJ1 521 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 NAPRTQ6XQN6 538 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 DPY19L3Q6ZPD9 716 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 SPNS2Q8IVW8 549 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 SREK1Q8WXA9 508 aaKnown RBP15.67■□□□□ 0.1
HDAC8-209ENST00000373589 ASIC4Q96FT7 647 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 MRGPRX3Q96LB0 322 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 LRRC37BQ96QE4 947 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 TMEM120AQ9BXJ8 343 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 SUV39H2Q9H5I1 410 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 ZFYVE1Q9HBF4 777 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 KCNK4Q9NYG8 393 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 ERVW-1Q9UQF0 538 aa15.67■□□□□ 0.1
HDAC8-209ENST00000373589 PRRC2BQ5JSZ5 2229 aaKnown RBP15.66■□□□□ 0.1
HDAC8-209ENST00000373589 TMEM114B3SHH9 223 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 WASH3PC4AMC7 463 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 CCDC166P0CW27 439 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 ADH5P11766 374 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 POLR2EP19388 210 aaKnown RBP15.66■□□□□ 0.1
HDAC8-209ENST00000373589 VASPP50552 380 aaPredicted RBP15.66■□□□□ 0.1
HDAC8-209ENST00000373589 ACTN3Q08043 901 aaPredicted RBP15.66■□□□□ 0.1
HDAC8-209ENST00000373589 SETDB1Q15047 1291 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 ACCSLQ4AC99 568 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 TECRLQ5HYJ1 363 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 LIPMQ5VYY2 423 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 TRIM68Q6AZZ1 485 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 PIM3Q86V86 326 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 PIWIL2Q8TC59 973 aaKnown RBP15.66■□□□□ 0.1
HDAC8-209ENST00000373589 FRS2Q8WU20 508 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 FGF13Q92913 245 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 SMARCD2Q92925 531 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 ZNF641Q96N77 438 aaPredicted RBP15.66■□□□□ 0.1
HDAC8-209ENST00000373589 GDF15Q99988 308 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 GATA5Q9BWX5 397 aaPredicted RBP15.66■□□□□ 0.1
HDAC8-209ENST00000373589 MYLK2Q9H1R3 596 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 VPS9D1Q9Y2B5 631 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 MED16Q9Y2X0 877 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 C2orf16Q68DN1 1984 aa15.66■□□□□ 0.1
HDAC8-209ENST00000373589 MYO1CO00159 1063 aa15.65■□□□□ 0.1
HDAC8-209ENST00000373589 GAPDHSO14556 408 aaPredicted RBP15.65■□□□□ 0.1
HDAC8-209ENST00000373589 DLX3O60479 287 aa15.65■□□□□ 0.1
HDAC8-209ENST00000373589 NDUFS3O75489 264 aa15.65■□□□□ 0.1
HDAC8-209ENST00000373589 FSBPO95073 299 aa15.65■□□□□ 0.1
HDAC8-209ENST00000373589 ADH1CP00326 375 aa15.65■□□□□ 0.1
HDAC8-209ENST00000373589 TTPAP49638 278 aa15.65■□□□□ 0.1
HDAC8-209ENST00000373589 ACAP2Q15057 778 aa15.65■□□□□ 0.1
HDAC8-209ENST00000373589 TCEAL5Q5H9L2 206 aa15.65■□□□□ 0.1
HDAC8-209ENST00000373589 AARS2Q5JTZ9 985 aaKnown RBP15.65■□□□□ 0.1
HDAC8-209ENST00000373589 RARS2Q5T160 578 aaKnown RBP15.65■□□□□ 0.1
HDAC8-209ENST00000373589 TMEM184AQ6ZMB5 413 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms