RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 CCNA2P20248 432 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 MYF6P23409 242 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 AKAP5P24588 427 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 CNTFP26441 200 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 HTR1BP28222 390 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 PIGAP37287 484 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 SLC1A2P43004 574 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 MAP2K4P45985 399 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 PLA2G16P53816 162 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 RPL26P61254 145 aaKnown RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 VBP1P61758 197 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 ADIGQ0VDE8 80 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 MADCAM1Q13477 382 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 SLC12A1Q13621 1099 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 TARBP2Q15633 366 aaKnown RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 TIGD2Q4W5G0 525 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 CCDC92Q53HC0 331 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 PAGE2BQ5JRK9 111 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 STXBP5Q5T5C0 1151 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 ZNF470Q6ECI4 717 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 LCLAT1Q6UWP7 414 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 TMEM135Q86UB9 458 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 CUZD1Q86UP6 607 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 CROCCP3Q8IVE0 287 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 OR2T34Q8NGX1 318 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 OR2T3Q8NH03 318 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 SLC2A14Q8TDB8 520 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 CHPT1Q8WUD6 406 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 SLC35F5Q8WV83 523 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 CAPSLQ8WWF8 208 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 DLG3Q92796 817 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 CASP10Q92851 521 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 RNF145Q96MT1 663 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 NT5C1AQ9BXI3 368 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 C1QTNF2Q9BXJ5 285 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 NDEL1Q9GZM8 345 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 DEFB129Q9H1M3 183 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 TPK1Q9H3S4 243 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 EHD1Q9H4M9 534 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 NOL6Q9H6R4 1146 aaKnown RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 ALG9Q9H6U8 611 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 LRRC40Q9H9A6 602 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 CARS2Q9HA77 564 aaKnown RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 ATP13A2Q9NQ11 1180 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 PDGFCQ9NRA1 345 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 INTS7Q9NVH2 962 aaKnown RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 TMEM181Q9P2C4 612 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 SUCOQ9UBS9 1254 aaKnown RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 IPO11Q9UI26 975 aaKnown RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 PADI4Q9UM07 663 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 TRAF6Q9Y4K3 522 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 GPC6Q9Y625 555 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 COL4A5P29400 1685 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 A0A0J9YYE9 177 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 A0A0U1RQS6 177 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 NCF1BA6NI72 391 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 A8MT66 165 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 NCF1CA8MVU1 366 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 FXYD1O00168 92 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 B4GALT4O60513 344 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 TSPAN3O60637 253 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 BCAS1O75363 584 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 ATP5BP06576 529 aaKnown RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 NCF1P14598 390 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 JAK1P23458 1154 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 DCKP27707 260 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 MZF1P28698 734 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 PRDX3P30048 256 aaKnown RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 ARL4AP40617 200 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 CCT8P50990 548 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 SELENBP1Q13228 472 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 DPYSQ14117 519 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 SELPLGQ14242 412 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 INSCQ1MX18 579 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 FAM83EQ2M2I3 478 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 CTU2Q2VPK5 515 aaKnown RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 PAGE3Q5JUK9 113 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 BTBD8Q5XKL5 378 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 TMEM207Q6UWW9 146 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 KRT27Q7Z3Y8 459 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 R3HCC1LQ7Z5L2 792 aaKnown RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 RBM23Q86U06 439 aaKnown RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 BPHLQ86WA6 291 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 LSRQ86X29 649 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 ADGRG5Q8IZF4 528 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 TTC30BQ8N4P2 665 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 CNTD1Q8N815 330 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 SLC7A14Q8TBB6 771 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 HM13Q8TCT9 377 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 SLC22A17Q8WUG5 538 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 ZNF775Q96BV0 537 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 SLC30A3Q99726 388 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 FUNDC2Q9BWH2 189 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 AKTIPQ9H8T0 292 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 HMX1Q9NP08 348 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 AGPAT4Q9NRZ5 378 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 RIC8BQ9NVN3 520 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 PAK1IP1Q9NWT1 392 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 DPP3Q9NY33 737 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 BFARQ9NZS9 450 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms