RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ABCB1P08183 1280 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 COX4I1P13073 169 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 ZNF10P21506 573 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 CORO1AP31146 461 aaKnown RBP13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 PIK3CGP48736 1102 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 SLC5A3P53794 718 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 SLC25A3Q00325 362 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 GRM3Q14832 879 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 DUPD1Q68J44 220 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 LCLAT1Q6UWP7 414 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 MILR1Q7Z6M3 343 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 TMEM132CQ8N3T6 1108 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 SPPL2AQ8TCT8 520 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 LRRC19Q9H756 370 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 ADPRHL2Q9NX46 363 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 TRIM43BA6NCK2 446 aa13.33□□□□□ -0.27
RAPGEF1-201ENST00000372189 EFCAB10A6NFE3 127 aa13.33□□□□□ -0.27
RAPGEF1-201ENST00000372189 CLDN11O75508 207 aa13.33□□□□□ -0.27
RAPGEF1-201ENST00000372189 PIGNO95427 931 aa13.33□□□□□ -0.27
RAPGEF1-201ENST00000372189 IL2P60568 153 aa13.33□□□□□ -0.27
RAPGEF1-201ENST00000372189 SMCO1Q147U7 214 aa13.33□□□□□ -0.27
RAPGEF1-201ENST00000372189 ZNF57Q68EA5 555 aaPredicted RBP13.33□□□□□ -0.27
RAPGEF1-201ENST00000372189 ZNF276Q8N554 614 aa13.33□□□□□ -0.27
RAPGEF1-201ENST00000372189 BPIFA1Q9NP55 256 aa13.33□□□□□ -0.27
RAPGEF1-201ENST00000372189 SOHLH2Q9NX45 425 aa13.33□□□□□ -0.27
RAPGEF1-201ENST00000372189 ARL15Q9NXU5 204 aa13.33□□□□□ -0.27
RAPGEF1-201ENST00000372189 PCDHA11Q9Y5I1 949 aa13.33□□□□□ -0.27
RAPGEF1-201ENST00000372189 ZNF142P52746 1687 aaPredicted RBP13.33□□□□□ -0.27
RAPGEF1-201ENST00000372189 STARP49675 285 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 MAPK10P53779 464 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 BROXQ5VW32 411 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 HLA-DQA1Q5Y7H0 255 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 ARCQ7LC44 396 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 ZNF605Q86T29 641 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 SSX3Q99909 188 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 AIFM2Q9BRQ8 373 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 CATP04040 527 aaKnown RBP13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 FGFR3P22607 806 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 CSNK2BP67870 215 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 TIMM50Q3ZCQ8 353 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 NEPROQ6NW34 567 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 IRGQQ8WZA9 623 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 SEMA4DQ92854 862 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 ADAM17P78536 824 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 PEX6Q13608 980 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 GRB14Q14449 540 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 SQLEQ14534 574 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 AADACL2Q6P093 401 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 GPSM1Q86YR5 675 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 SNX8Q9Y5X2 465 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 QSOX1O00391 747 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 MSI1O43347 362 aaKnown RBP13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 ARHGAP1Q07960 439 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 NR1D2Q14995 579 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 TAF5Q15542 800 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 PAGE2BQ5JRK9 111 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 PYHIN1Q6K0P9 492 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 CYP20A1Q6UW02 462 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 ADHFE1Q8IWW8 467 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 CFAP52Q8N1V2 620 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 DPP10Q8N608 796 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 DGCR6LQ9BY27 220 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 ST6GALNAC4Q9H4F1 302 aa13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 RSL24D1Q9UHA3 163 aaKnown RBP13.33□□□□□ -0.28
RAPGEF1-201ENST00000372189 LIASO43766 372 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 ERCC2P18074 760 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 SWI5Q1ZZU3 235 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 VARS2Q5ST30 1063 aaKnown RBP13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 RBM44Q6ZP01 1051 aaKnown RBP13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 ALLCQ8N6M5 410 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 GRPEL2Q8TAA5 225 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 NPLOC4Q8TAT6 608 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 ZNF384Q8TF68 577 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 C2orf15Q8WU43 125 aaKnown RBP13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 PFDN5Q99471 154 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 SPATA7Q9P0W8 599 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 FTH1P02794 183 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 ATAD3CQ5T2N8 411 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 EPHX4Q8IUS5 362 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 PJA1Q8NG27 643 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 SERPINA6P08185 405 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 ZSCAN5DPP0CG00 497 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 DDX6P26196 483 aaKnown RBP eCLIP13.32□□□□□ -0.286e-6■■■■■ 31.2
RAPGEF1-201ENST00000372189 C16orf46Q6P387 395 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 CNKSR3Q6P9H4 555 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 C1orf127Q8N9H9 656 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 PLEKHG4BQ96PX9 1271 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 DUS2Q9NX74 493 aaKnown RBP13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 OPTCQ9UBM4 332 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 TRIM38O00635 465 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 TTPAP49638 278 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 CHMP1BQ7LBR1 199 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 PCDH20Q8N6Y1 951 aaKnown RBP13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 FAM84AQ96KN4 292 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 MBOAT7Q96N66 472 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 AIF1LQ9BQI0 150 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 SH3BP4Q9P0V3 963 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 TRPC4Q9UBN4 977 aa13.32□□□□□ -0.28
RAPGEF1-201ENST00000372189 ZMYM5Q9UJ78 669 aa13.32□□□□□ -0.28
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