RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 WFIKKN2Q8TEU8 576 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 SORCS1Q8WY21 1168 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 CCT6BQ92526 530 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 LPGAT1Q92604 370 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 TIFAQ96CG3 184 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 ZFYVE19Q96K21 471 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 TSNARE1Q96NA8 513 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 C20orf27Q9GZN8 174 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 SUV39H2Q9H5I1 410 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 ZDHHC6Q9H6R6 413 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 NPHS2Q9NP85 383 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 KIAA1549LQ6ZVL6 1849 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 TARM1B6A8C7 271 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 BNIP3LO60238 219 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 NFATC1O95644 943 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 SP100P23497 879 aaPredicted RBP17.5■□□□□ 0.39
SSBP3-203ENST00000371319 PSAPL1Q6NUJ1 521 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 TMEM207Q6UWW9 146 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 ZYG11AQ6WRX3 759 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 PIANPQ8IYJ0 282 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 ST13P5Q8NFI4 369 aaPredicted RBP17.5■□□□□ 0.39
SSBP3-203ENST00000371319 OR2A12Q8NGT7 310 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 RDH11Q8TC12 318 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 HEXDCQ8WVB3 486 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 RMDN2Q96LZ7 410 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 LYSMD1Q96S90 227 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 TCF12Q99081 682 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 C19orf43Q9BQ61 176 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 PLCD4Q9BRC7 762 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 AARSD1Q9BTE6 412 aaKnown RBP17.5■□□□□ 0.39
SSBP3-203ENST00000371319 EBF3Q9H4W6 596 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 FAM96AQ9H5X1 160 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 SLC27A6Q9Y2P4 619 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 PPIL1Q9Y3C6 166 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 PKP3Q9Y446 797 aa17.5■□□□□ 0.39
SSBP3-203ENST00000371319 MUC22E2RYF6 1773 aaPredicted RBP17.5■□□□□ 0.39
SSBP3-203ENST00000371319 OTOL1A6NHN0 477 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-203ENST00000371319 TTC34A8MYJ7 566 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 TULP3O75386 442 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 SERPINE1P05121 402 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 TROVE2P10155 538 aaKnown RBP eCLIP17.49■□□□□ 0.39
SSBP3-203ENST00000371319 HOXB8P17481 243 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-203ENST00000371319 PMLP29590 882 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 SUOXP51687 545 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 PTPRNQ16849 979 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 TSNAXIP1Q2TAA8 658 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 TANGO2Q6ICL3 276 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 FSTL5Q8N475 847 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-203ENST00000371319 SPATA6LQ8N4H0 392 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 PPP1R14CQ8TAE6 165 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 TTC8Q8TAM2 541 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 SCYL1Q96KG9 808 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 ZNF641Q96N77 438 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-203ENST00000371319 FAM83CQ9BQN1 747 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 HPS4Q9NQG7 708 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 ABCF3Q9NUQ8 709 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 MID2Q9UJV3 735 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 CDH7Q9ULB5 785 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 MTF2Q9Y483 593 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-203ENST00000371319 TRANK1O15050 2925 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 C1orf232A0A0U1RR37 186 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-203ENST00000371319 TK2O00142 265 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 GAPDHSO14556 408 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-203ENST00000371319 ITM2AO43736 263 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 CLDN7O95471 211 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 ASLP04424 464 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 SRPRAP08240 638 aaKnown RBP17.49■□□□□ 0.39
SSBP3-203ENST00000371319 MYL2P10916 166 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 RALBP11234 206 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 SLC6A11P48066 632 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 GLRBP48167 497 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 RAD51Q06609 339 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 ZRANB3Q5FWF4 1079 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 RNF187Q5TA31 235 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-203ENST00000371319 COL13A1Q5TAT6 717 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-203ENST00000371319 ATG14Q6ZNE5 492 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 TRPM8Q7Z2W7 1104 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 TBC1D1Q86TI0 1168 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-203ENST00000371319 PIM3Q86V86 326 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 ZNF398Q8TD17 642 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 ANKRD49Q8WVL7 239 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 UBXN10Q96LJ8 280 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 KDM4CQ9H3R0 1056 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 KCNK13Q9HB14 408 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 ZFYVE1Q9HBF4 777 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 THAP1Q9NVV9 213 aa17.49■□□□□ 0.39
SSBP3-203ENST00000371319 CPSF2Q9P2I0 782 aaKnown RBP17.49■□□□□ 0.39
SSBP3-203ENST00000371319 NPIPB15A6NHN6 443 aaPredicted RBP17.48■□□□□ 0.39
SSBP3-203ENST00000371319 NDUFS3O75489 264 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 LYPLA1O75608 230 aaPredicted RBP17.48■□□□□ 0.39
SSBP3-203ENST00000371319 KIAA0754O94854 1291 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 UGT2B4P06133 528 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 LTA4HP09960 611 aaKnown RBP17.48■□□□□ 0.39
SSBP3-203ENST00000371319 ARRB2P32121 409 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 BMP8BP34820 402 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 CACNG1Q06432 222 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 MESP2Q0VG99 397 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 ITGA9Q13797 1035 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 CSHL1Q14406 222 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms