RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 IDH3AP50213 366 aa12.83□□□□□ -0.36
GPC3-201ENST00000370818 ALDH18A1P54886 795 aaKnown RBP12.83□□□□□ -0.36
GPC3-201ENST00000370818 POU4F1Q01851 419 aa12.83□□□□□ -0.36
GPC3-201ENST00000370818 ACVR1Q04771 509 aa12.83□□□□□ -0.36
GPC3-201ENST00000370818 TWF1Q12792 350 aa12.83□□□□□ -0.36
GPC3-201ENST00000370818 GALNT3Q14435 633 aa12.83□□□□□ -0.36
GPC3-201ENST00000370818 VWA5B1Q5TIE3 1220 aa12.83□□□□□ -0.36
GPC3-201ENST00000370818 LRRC8EQ6NSJ5 796 aa12.83□□□□□ -0.36
GPC3-201ENST00000370818 DNAJB7Q7Z6W7 309 aaPredicted RBP12.83□□□□□ -0.36
GPC3-201ENST00000370818 LDB1Q86U70 411 aaPredicted RBP12.83□□□□□ -0.36
GPC3-201ENST00000370818 GDPD5Q8WTR4 605 aa12.83□□□□□ -0.36
GPC3-201ENST00000370818 ZFRQ96KR1 1074 aaKnown RBP12.83□□□□□ -0.36
GPC3-201ENST00000370818 PHF12Q96QT6 1004 aa12.83□□□□□ -0.36
GPC3-201ENST00000370818 UNKQ9C0B0 810 aaKnown RBP12.83□□□□□ -0.36
GPC3-201ENST00000370818 MFSD1Q9H3U5 465 aa12.83□□□□□ -0.36
GPC3-201ENST00000370818 MARCH4Q9P2E8 410 aaPredicted RBP12.83□□□□□ -0.36
GPC3-201ENST00000370818 XPR1Q9UBH6 696 aa12.83□□□□□ -0.36
GPC3-201ENST00000370818 LZTS1Q9Y250 596 aa12.83□□□□□ -0.36
GPC3-201ENST00000370818 ARL5AQ9Y689 179 aa12.83□□□□□ -0.36
GPC3-201ENST00000370818 ILVBLA1L0T0 632 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 TMEM114B3SHH9 223 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 TXNDC9O14530 226 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 TSPAN3O60637 253 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 TRMUO75648 421 aaKnown RBP12.82□□□□□ -0.36
GPC3-201ENST00000370818 KLHL2O95198 593 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 FGF1P05230 155 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 SERPINF2P08697 491 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 CLTBP09497 229 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 PEX2P28328 305 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 UBAP2LQ14157 1087 aaKnown RBP12.82□□□□□ -0.36
GPC3-201ENST00000370818 PTPRCAPQ14761 206 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 LIPMQ5VYY2 423 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 GALNT7Q86SF2 657 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 BLOC1S5Q8TDH9 187 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 C17orf50Q8WW18 174 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 SLC22A12Q96S37 553 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 DNAJC28Q9NX36 388 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 SMPD4Q9NXE4 827 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 SEPT3Q9UH03 358 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 MID2Q9UJV3 735 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 DMTF1Q9Y222 760 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 A0A088AWK7 358 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 A0A1B0GVM2 712 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 TCAF2A6NFQ2 919 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 PRR5-ARHGAP8B1AHC4 643 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 PRRG1O14668 218 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 DLX3O60479 287 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 PDE5AO76074 875 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 HSPA4LO95757 839 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 CHRNGP07510 517 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 PIRTP0C851 137 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 CR2P20023 1033 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 MTTPP55157 894 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 ARHGAP8P85298 464 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 KDSRQ06136 332 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 TAF12Q16514 161 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 DNAL1Q4LDG9 190 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 CXorf57Q6NSI4 855 aaKnown RBP12.82□□□□□ -0.36
GPC3-201ENST00000370818 CHST9Q7L1S5 443 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 TMC7Q7Z402 723 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 ZNF784Q8NCA9 323 aaPredicted RBP12.82□□□□□ -0.36
GPC3-201ENST00000370818 OR6P1Q8NGX9 317 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 ABHD8Q96I13 439 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 SCYL1Q96KG9 808 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 EXOC2Q96KP1 924 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 TBATAQ96M53 351 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 TSNARE1Q96NA8 513 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 BTBD9Q96Q07 612 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 CYP2S1Q96SQ9 504 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 IGSF5Q9NSI5 407 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.82□□□□□ -0.364e-7■■■■■ 34.4
GPC3-201ENST00000370818 UBA2Q9UBT2 640 aaPredicted RBP12.82□□□□□ -0.36
GPC3-201ENST00000370818 SUN2Q9UH99 717 aa12.82□□□□□ -0.36
GPC3-201ENST00000370818 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.81□□□□□ -0.36
GPC3-201ENST00000370818 SPECC1L-ADORA2AF8WAN1 911 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 H2AFYO75367 372 aaKnown RBP12.81□□□□□ -0.36
GPC3-201ENST00000370818 S1PR4O95977 384 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 RHOCP08134 193 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 CSF2RAP15509 400 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 CCR10P46092 362 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 GRIA4P48058 902 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 ZXDBP98169 803 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 ZNF177Q13360 481 aaPredicted RBP12.81□□□□□ -0.36
GPC3-201ENST00000370818 VEPH1Q14D04 833 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 TLR1Q15399 786 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 ADRM1Q16186 407 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 CCDC80Q76M96 950 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 C16orf59Q7L2K0 433 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 DDX53Q86TM3 631 aaKnown RBP12.81□□□□□ -0.36
GPC3-201ENST00000370818 SETD3Q86TU7 594 aaPredicted RBP12.81□□□□□ -0.36
GPC3-201ENST00000370818 MARVELD2Q8N4S9 558 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 HEXDCQ8WVB3 486 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 GRIP2Q9C0E4 1043 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 CDH19Q9H159 772 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 ZNF334Q9HCZ1 680 aaPredicted RBP12.81□□□□□ -0.36
GPC3-201ENST00000370818 UBAP1Q9NZ09 502 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 SPG21Q9NZD8 308 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 TAGLN3Q9UI15 199 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 STOML2Q9UJZ1 356 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 SSX2IPQ9Y2D8 614 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms