RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 WSCD2Q2TBF2 565 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 FAXCQ5TGI0 409 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 ESRP1Q6NXG1 681 aaKnown RBP13.75□□□□□ -0.21
SSR4-202ENST00000370085 LYSMD3Q7Z3D4 306 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 HSD11B1LQ7Z5J1 315 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 NLRP8Q86W28 1048 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 KLHDC8BQ8IXV7 354 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 TAB3Q8N5C8 712 aaPredicted RBP13.75□□□□□ -0.21
SSR4-202ENST00000370085 PDCD7Q8N8D1 485 aaKnown RBP13.75□□□□□ -0.21
SSR4-202ENST00000370085 ZNF592Q92610 1267 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 AP2M1Q96CW1 435 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 TUBB2BQ9BVA1 445 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 WDR26Q9H7D7 661 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 ERVMER34-1Q9H9K5 563 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 ARNT2Q9HBZ2 717 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 EIF2B3Q9NR50 452 aaKnown RBP13.75□□□□□ -0.21
SSR4-202ENST00000370085 PHPT1Q9NRX4 125 aaPredicted RBP13.75□□□□□ -0.21
SSR4-202ENST00000370085 SMARCAL1Q9NZC9 954 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 SHOC2Q9UQ13 582 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.75□□□□□ -0.21
SSR4-202ENST00000370085 LAMA1P25391 3075 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 POM121BA6NF01 834 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 H0Y8X5 98 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 RAD51BO15315 384 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 PIRTP0C851 137 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 ETS1P14921 441 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 TGM1P22735 817 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 TEAD1P28347 426 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 IGFALSP35858 605 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 HMGCLP35914 325 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 CTSKP43235 329 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 CHRNA4P43681 627 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 GPR1P46091 355 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 SPINT3P49223 89 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 GPS1Q13098 491 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 PDE1CQ14123 709 aaPredicted RBP13.74□□□□□ -0.21
SSR4-202ENST00000370085 INPP5AQ14642 412 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 SUZ12Q15022 739 aaKnown RBP13.74□□□□□ -0.21
SSR4-202ENST00000370085 HLA-BQ31612 363 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 INAVAQ3KP66 663 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 KCTD11Q693B1 232 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 RAET1GQ6H3X3 334 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 PNCKQ6P2M8 343 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 TTC27Q6P3X3 843 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 Q6ZVL8 140 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 SYDE1Q6ZW31 735 aaPredicted RBP13.74□□□□□ -0.21
SSR4-202ENST00000370085 CBARPQ8N350 705 aaPredicted RBP13.74□□□□□ -0.21
SSR4-202ENST00000370085 MINDY1Q8N5J2 469 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 OR13H1Q8NG92 308 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 BRSK1Q8TDC3 778 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 NETO1Q8TDF5 533 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 BMFQ96LC9 184 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 APOL2Q9BQE5 337 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 GORASP1Q9BQQ3 440 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 ZSCAN5AQ9BUG6 496 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 FAM83DQ9H4H8 585 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 GAREM1Q9H706 876 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 PCYOX1Q9UHG3 505 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 CA5BQ9Y2D0 317 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 SNX11Q9Y5W9 270 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 SLCO1B1Q9Y6L6 691 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 ADAMTS9Q9P2N4 1935 aa13.74□□□□□ -0.21
SSR4-202ENST00000370085 TP53BP1Q12888 1972 aaPredicted RBP13.73□□□□□ -0.21
SSR4-202ENST00000370085 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.73□□□□□ -0.21
SSR4-202ENST00000370085 GOLGA8CPA6NN73 597 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 H3BM21 787 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 NDC80O14777 642 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 STX7O15400 261 aaKnown RBP13.73□□□□□ -0.21
SSR4-202ENST00000370085 USP12O75317 370 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 URI1O94763 535 aaPredicted RBP13.73□□□□□ -0.21
SSR4-202ENST00000370085 SUN1O94901 812 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 WNT1P04628 370 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 HOXC4P09017 264 aaPredicted RBP13.73□□□□□ -0.21
SSR4-202ENST00000370085 C1SP09871 688 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 ZSCAN5DPP0CG00 497 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 ZNF883P0CG24 379 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 LPOP22079 712 aaPredicted RBP13.73□□□□□ -0.21
SSR4-202ENST00000370085 CCT8P50990 548 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 BLKP51451 505 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 LIMK1P53667 647 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 DCDC1P59894 354 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 PFN3P60673 137 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 SLC14A1Q13336 389 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 SPARCL1Q14515 664 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 TAF1AQ15573 450 aaPredicted RBP13.73□□□□□ -0.21
SSR4-202ENST00000370085 TRIP13Q15645 432 aaPredicted RBP13.73□□□□□ -0.21
SSR4-202ENST00000370085 PDPK2PQ6A1A2 396 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 LAYNQ6UX15 382 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 MACC1Q6ZN28 852 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 TMC3Q7Z5M5 1100 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 TECPR1Q7Z6L1 1165 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 PARGQ86W56 976 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 KIF18AQ8NI77 898 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 SLCO2A1Q92959 643 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 PLEKHG4BQ96PX9 1271 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 ELF4Q99607 663 aaPredicted RBP13.73□□□□□ -0.21
SSR4-202ENST00000370085 C19orf43Q9BQ61 176 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 APOOQ9BUR5 198 aa13.73□□□□□ -0.21
SSR4-202ENST00000370085 DDX47Q9H0S4 455 aaKnown RBP13.73□□□□□ -0.21
SSR4-202ENST00000370085 MBNL1Q9NR56 388 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms