RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 MYF5P13349 255 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 PTPN7P35236 360 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 BLKP51451 505 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 COPS2P61201 443 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 C1orf61Q13536 156 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 LLGL1Q15334 1064 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 DEFB133Q30KQ1 61 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 FAXCQ5TGI0 409 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 ENPP7Q6UWV6 458 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 B4GALNT4Q76KP1 1039 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 ZNF765Q7L2R6 523 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 SDR16C5Q8N3Y7 309 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 FSTL5Q8N475 847 aaPredicted RBP20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 ATL2Q8NHH9 583 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 PDXPQ96GD0 296 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 RBM41Q96IZ5 413 aaKnown RBP20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 TEKT5Q96M29 485 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 RBM15Q96T37 977 aaKnown RBP eCLIP20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 CEP41Q9BYV8 373 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 SLC25A51Q9H1U9 297 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 TTLL3Q9Y4R7 772 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 ANKRD66B4E2M5 251 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 IPO7O95373 1038 aaKnown RBP20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 FUCA1P04066 466 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 GP1BAP07359 652 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 CA4P22748 312 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 CD68P34810 354 aaPredicted RBP20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 CLDN6P56747 220 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 INSM1Q01101 510 aaPredicted RBP20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 ARHGEF7Q14155 803 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 CCDC157Q569K6 752 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 ODF2Q5BJF6 829 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 KAZNQ674X7 775 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 LVRNQ6Q4G3 990 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 NT5DC3Q86UY8 548 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 HID1Q8IV36 788 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 NDUFAF2Q8N183 169 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 OR56A4Q8NGH8 313 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 ALG3Q92685 438 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 AGAP3Q96P47 875 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 WDR24Q96S15 920 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 FRMD8Q9BZ67 464 aaPredicted RBP20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 ABCG8Q9H221 673 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 WDR26Q9H7D7 661 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 GLOD4Q9HC38 313 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 KLQ9UEF7 1012 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 DNPEPQ9ULA0 475 aa20.51■□□□□ 0.87
SMNDC1-201ENST00000369592 FAM149AA5PLN7 773 aa20.5■□□□□ 0.87
SMNDC1-201ENST00000369592 CACNB4O00305 520 aaPredicted RBP20.5■□□□□ 0.87
SMNDC1-201ENST00000369592 MYCLP1P12525 358 aaPredicted RBP20.5■□□□□ 0.87
SMNDC1-201ENST00000369592 E2F1Q01094 437 aa20.5■□□□□ 0.87
SMNDC1-201ENST00000369592 C6orf132Q5T0Z8 1188 aa20.5■□□□□ 0.87
SMNDC1-201ENST00000369592 CDCP2Q5VXM1 449 aa20.5■□□□□ 0.87
SMNDC1-201ENST00000369592 SLC35F3Q8IY50 421 aa20.5■□□□□ 0.87
SMNDC1-201ENST00000369592 SPC24Q8NBT2 197 aa20.5■□□□□ 0.87
SMNDC1-201ENST00000369592 LPCAT1Q8NF37 534 aa20.5■□□□□ 0.87
SMNDC1-201ENST00000369592 KIAA1524Q8TCG1 905 aa20.5■□□□□ 0.87
SMNDC1-201ENST00000369592 TFB1MQ8WVM0 346 aaKnown RBP20.5■□□□□ 0.87
SMNDC1-201ENST00000369592 EID2BQ96D98 161 aa20.5■□□□□ 0.87
SMNDC1-201ENST00000369592 DKK4Q9UBT3 224 aa20.5■□□□□ 0.87
SMNDC1-201ENST00000369592 CCDC66A2RUB6 948 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 EME2A4GXA9 379 aaPredicted RBP20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 TAF4O00268 1085 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 CEACAM5P06731 702 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 KELP23276 732 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 EPHB1P54762 984 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 DAB2P98082 770 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 CDK3Q00526 305 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 ELOCQ15369 112 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 HS1BP3Q53T59 392 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 HES3Q5TGS1 186 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 DENND2CQ68D51 928 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 ADAMTSL4Q6UY14 1074 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 HEATR4Q86WZ0 1026 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 NRSN1Q8IZ57 195 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 DCBLD1Q8N8Z6 715 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 P3H4Q92791 437 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 SCARF2Q96GP6 870 aaPredicted RBP20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 QKIQ96PU8 341 aaKnown RBP eCLIP20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 MRPL40Q9NQ50 206 aaKnown RBP20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 NCKIPSDQ9NZQ3 722 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 TRIM10Q9UDY6 481 aa20.49■□□□□ 0.87
SMNDC1-201ENST00000369592 SCN8AQ9UQD0 1980 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 HACD1B0YJ81 288 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 APOC4-APOC2K7ER74 178 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 MTSS1O43312 755 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 OPA1O60313 960 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 CLDN7O95471 211 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 TNFP01375 233 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 APOC2P02655 101 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 ANXA6P08133 673 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 DUSP3P51452 185 aaPredicted RBP20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 XRCC4Q13426 336 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 NOMO1Q15155 1222 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 SPATA22Q8NHS9 363 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 PTCD2Q8WV60 388 aaKnown RBP20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 SCAMP4Q969E2 229 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 AGAP2Q99490 1192 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms