RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 P4HA1P13674 534 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 TFE3P19532 575 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-204ENST00000369530 PCSK1P29120 753 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 MTAPQ13126 283 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 AGERQ15109 404 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 RGS21Q2M5E4 152 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 RAB6CQ53S08 254 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 SLC26A9Q7LBE3 791 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 ASCL5Q7RTU5 278 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 DCP1BQ8IZD4 617 aaKnown RBP6.9□□□□□ -1.3
CSDE1-204ENST00000369530 CPXM1Q96SM3 734 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 HAUS8Q9BT25 410 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 RAB6CQ9H0N0 254 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 IKBKGQ9Y6K9 419 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 ATG2BQ96BY7 2078 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 YJEFN3A6XGL0 299 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 PRRT4C9JH25 899 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 DNAJA2O60884 412 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 KCNJ13O60928 360 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 XYLBO75191 536 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 EPN2O95208 641 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 CXCR2P25025 360 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 FDFT1P37268 417 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 CXCR3P49682 368 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 PITX1P78337 314 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-204ENST00000369530 THOC5Q13769 683 aaKnown RBP6.9□□□□□ -1.3
CSDE1-204ENST00000369530 PTPN20Q4JDL3 420 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 TXNDC8Q6A555 127 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 GPR180Q86V85 440 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 SLC47A2Q86VL8 602 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 SYCE1Q8N0S2 351 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 PDZD8Q8NEN9 1154 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 SLC35G2Q8TBE7 412 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 RMDN1Q96DB5 314 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 CENPOQ9BU64 300 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 HOXD1Q9GZZ0 328 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 THAP2Q9H0W7 228 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 TDP1Q9NUW8 608 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 TAS2R14Q9NYV8 317 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 PPARGC1AQ9UBK2 798 aaKnown RBP6.9□□□□□ -1.3
CSDE1-204ENST00000369530 KCNN3Q9UGI6 736 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 AMACRQ9UHK6 382 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 PPM1HQ9ULR3 514 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 NEU2Q9Y3R4 380 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 DYTNA2CJ06 578 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 CFAP69A5D8W1 941 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 OR5K3A6NET4 321 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 B8ZZF3 427 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 F8VP50 259 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 BET1O15155 118 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 TP73O15350 636 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 THAP12O43422 761 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 SIN3BO75182 1162 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 EGFP01133 1207 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 ABHD2P08910 425 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 CTNNA2P26232 953 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 OGDHQ02218 1023 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 TLR1Q15399 786 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 TMEM92Q6UXU6 159 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 C4orf22Q6V702 233 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 IDO2Q6ZQW0 420 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 C12orf50Q8NA57 414 aaPredicted RBP6.9□□□□□ -1.31
CSDE1-204ENST00000369530 IL17RCQ8NAC3 791 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 MAML1Q92585 1016 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 CYP2S1Q96SQ9 504 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 ACE2Q9BYF1 805 aaPredicted RBP6.9□□□□□ -1.31
CSDE1-204ENST00000369530 FAM126AQ9BYI3 521 aaPredicted RBP6.9□□□□□ -1.31
CSDE1-204ENST00000369530 NUF2Q9BZD4 464 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 ARL8BQ9NVJ2 186 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 TRNAU1APQ9NX07 287 aaKnown RBP6.9□□□□□ -1.31
CSDE1-204ENST00000369530 AGO1Q9UL18 857 aaKnown RBP6.9□□□□□ -1.31
CSDE1-204ENST00000369530 CACNA1IQ9P0X4 2223 aa6.9□□□□□ -1.31
CSDE1-204ENST00000369530 CHEK2O96017 543 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 SLC1A1P43005 524 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 HSPA13P48723 471 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 P2RX3P56373 397 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 EFTUD2Q15029 972 aaKnown RBP eCLIP6.89□□□□□ -1.311e-9■□□□□ 8.8
CSDE1-204ENST00000369530 SF3B4Q15427 424 aaKnown RBP eCLIP6.89□□□□□ -1.313e-8■■■□□ 18.4
CSDE1-204ENST00000369530 TBCCQ15814 346 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 DNAL1Q4LDG9 190 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 PIK3R6Q5UE93 754 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 RIPOR1Q6ZS17 1223 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 SLC38A6Q8IZM9 456 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 PLD4Q96BZ4 506 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 KXD1Q9BQD3 176 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 OSBPL8Q9BZF1 889 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 CLPBQ9H078 707 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 LINC00597Q9H2U6 94 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 TBC1D17Q9HA65 648 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 RIC8BQ9NVN3 520 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 GMIPQ9P107 970 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 UXTQ9UBK9 157 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-204ENST00000369530 TLR6Q9Y2C9 796 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 FAM172BPA6NC97 362 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 SHOXO15266 292 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 GYG2O15488 501 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 FOXD2O60548 495 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-204ENST00000369530 LRP3O75074 770 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 GUCY1B2O75343 617 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 ENO2P09104 434 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms