RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 STX16O14662 325 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 C9orf64Q5T6V5 341 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 HJURPQ8NCD3 748 aaPredicted RBP18.16■□□□□ 0.5
SNX27-202ENST00000368841 AGAP11Q8TF27 550 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 ITCHQ96J02 903 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 VCPIP1Q96JH7 1222 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 ALG2Q9H553 416 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 ERGIC3Q9Y282 383 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 TIMM22Q9Y584 194 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 A8MUI8 341 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 RECQL5O94762 991 aaPredicted RBP18.16■□□□□ 0.5
SNX27-202ENST00000368841 ANPEPP15144 967 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 IGFALSP35858 605 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 FAM91A1Q658Y4 838 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 KCT2Q8NC54 265 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 ZNF483Q8TF39 744 aaPredicted RBP18.16■□□□□ 0.5
SNX27-202ENST00000368841 IKZF2Q9UKS7 526 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 CLCN5P51795 746 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 LPCAT4Q643R3 524 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 SPPL2CQ8IUH8 684 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 PJA1Q8NG27 643 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 C5orf34Q96MH7 638 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 ZNF214Q9UL59 606 aaPredicted RBP18.16■□□□□ 0.5
SNX27-202ENST00000368841 AK5Q9Y6K8 562 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 PPRC1Q5VV67 1664 aaKnown RBP18.16■□□□□ 0.5
SNX27-202ENST00000368841 STX11O75558 287 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 QPRTQ15274 297 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 TAB1Q15750 504 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 RIOX2Q8IUF8 465 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 B3GALT6Q96L58 329 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 TSSK3Q96PN8 268 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 CYP2S1Q96SQ9 504 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 ADGRE2Q9UHX3 823 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 LRRIQ1Q96JM4 1722 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 RLN1P04808 185 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 RPLP2P05387 115 aaKnown RBP18.15■□□□□ 0.5
SNX27-202ENST00000368841 NAB1Q13506 487 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 JOSD2Q8TAC2 188 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 FBXW2Q9UKT8 454 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 A0A087WXM4 84 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 CACNB4O00305 520 aaPredicted RBP18.15■□□□□ 0.5
SNX27-202ENST00000368841 SLC9A3R1O14745 358 aaPredicted RBP18.15■□□□□ 0.5
SNX27-202ENST00000368841 MTRF1O75570 445 aaKnown RBP18.15■□□□□ 0.5
SNX27-202ENST00000368841 SNUPNO95149 360 aaKnown RBP18.15■□□□□ 0.5
SNX27-202ENST00000368841 LPOP22079 712 aaPredicted RBP18.15■□□□□ 0.5
SNX27-202ENST00000368841 SSR2P43308 183 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 KCNA10Q16322 511 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 BROXQ5VW32 411 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 FAM131AQ6UXB0 335 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 IKBIPQ70UQ0 350 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 FAM110BQ8TC76 370 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 RCCD1A6NED2 376 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 ADH1AP07327 375 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 NR4A1P22736 598 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 FBXO15Q8NCQ5 510 aaPredicted RBP18.15■□□□□ 0.5
SNX27-202ENST00000368841 MYDGFQ969H8 173 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 MAML3Q96JK9 1138 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 FCRL2Q96LA5 508 aaPredicted RBP18.15■□□□□ 0.5
SNX27-202ENST00000368841 DLC1Q96QB1 1528 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 URADA6NGE7 173 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 SAGP10523 405 aaPredicted RBP18.15■□□□□ 0.5
SNX27-202ENST00000368841 TKTP29401 623 aaKnown RBP18.15■□□□□ 0.5
SNX27-202ENST00000368841 CLEC6AQ6EIG7 209 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 ZNF730Q6ZMV8 503 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 UBE2J2Q8N2K1 259 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 OR2L5Q8NG80 312 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 PIWIL2Q8TC59 973 aaKnown RBP18.15■□□□□ 0.5
SNX27-202ENST00000368841 ARMC5Q96C12 935 aa18.15■□□□□ 0.5
SNX27-202ENST00000368841 CYP3A4P08684 503 aa18.14■□□□□ 0.5
SNX27-202ENST00000368841 CORO1AP31146 461 aaKnown RBP18.14■□□□□ 0.5
SNX27-202ENST00000368841 PTDSS1P48651 473 aaKnown RBP18.14■□□□□ 0.5
SNX27-202ENST00000368841 FMO1Q01740 532 aa18.14■□□□□ 0.5
SNX27-202ENST00000368841 BST1Q10588 318 aa18.14■□□□□ 0.5
SNX27-202ENST00000368841 LIPMQ5VYY2 423 aa18.14■□□□□ 0.5
SNX27-202ENST00000368841 NET1Q7Z628 596 aaPredicted RBP18.14■□□□□ 0.5
SNX27-202ENST00000368841 CHERPQ8IWX8 916 aaKnown RBP18.14■□□□□ 0.5
SNX27-202ENST00000368841 ADAM28Q9UKQ2 775 aa18.14■□□□□ 0.5
SNX27-202ENST00000368841 KLRG2A4D1S0 409 aaPredicted RBP18.14■□□□□ 0.49
SNX27-202ENST00000368841 UGT2B17O75795 530 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 SLC26A3P40879 764 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 ABRAXAS1Q6UWZ7 409 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 GAL3ST4Q96RP7 486 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 HBEGFQ99075 208 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 TPK1Q9H3S4 243 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 HMG20AQ9NP66 347 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 SLCO1B3Q9NPD5 702 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 SLC27A6Q9Y2P4 619 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 COL5A2P05997 1499 aaPredicted RBP18.14■□□□□ 0.49
SNX27-202ENST00000368841 RIMS1Q86UR5 1692 aaKnown RBP18.14■□□□□ 0.49
SNX27-202ENST00000368841 UBE2QL1A1L167 161 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 PDE2AO00408 941 aaPredicted RBP18.14■□□□□ 0.49
SNX27-202ENST00000368841 SAP18O00422 153 aaKnown RBP18.14■□□□□ 0.49
SNX27-202ENST00000368841 OTCP00480 354 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 IL18Q14116 193 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 SMU1Q2TAY7 513 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 C7orf61Q8IZ16 206 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 PPP3R2Q96LZ3 170 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 VAT1Q99536 393 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 TMEM134Q9H6X4 195 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 NMUR1Q9HB89 426 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms