RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 EXD3Q8N9H8 876 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 KIAA1524Q8TCG1 905 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 ZDHHC1Q8WTX9 485 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 TMEM159Q96B96 161 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 ZNF653Q96CK0 615 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 SGF29Q96ES7 293 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 COQ10AQ96MF6 247 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 PSKH2Q96QS6 385 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 SYT11Q9BT88 431 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 GSDMCQ9BYG8 508 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 RDH14Q9HBH5 336 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 PHPT1Q9NRX4 125 aaPredicted RBP10.35□□□□□ -0.75
CLRN3-201ENST00000368671 SPATS2LQ9NUQ6 558 aaKnown RBP10.35□□□□□ -0.75
CLRN3-201ENST00000368671 CWC15Q9P013 229 aaKnown RBP10.35□□□□□ -0.75
CLRN3-201ENST00000368671 FOXJ2Q9P0K8 574 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 SEPT10Q9P0V9 454 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 MAP10Q9P2G4 905 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 CNOT8Q9UFF9 292 aaKnown RBP10.35□□□□□ -0.75
CLRN3-201ENST00000368671 ACSL6Q9UKU0 697 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 PCDHGC4Q9Y5F7 938 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 SMG1Q96Q15 3661 aaKnown RBP10.35□□□□□ -0.75
CLRN3-201ENST00000368671 LRRC10BA6NIK2 292 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 RHPN2P1A8MT19 583 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 C9orf172C9J069 976 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 H3BRJ5 948 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 LRCH4O75427 683 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 HEXIM1O94992 359 aaKnown RBP10.34□□□□□ -0.75
CLRN3-201ENST00000368671 CYP2A6P11509 494 aaPredicted RBP10.34□□□□□ -0.75
CLRN3-201ENST00000368671 CCNB1P14635 433 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 AMPD1P23109 780 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 AK4P27144 223 aaPredicted RBP10.34□□□□□ -0.75
CLRN3-201ENST00000368671 ALDH4A1P30038 563 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 OR1D5P58170 312 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 MAXP61244 160 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 B4GALNT1Q00973 533 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 ILF3Q12906 894 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLRN3-201ENST00000368671 DPYSQ14117 519 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 C16orf72Q14CZ0 275 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 PTPRRQ15256 657 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 SMTNL2Q2TAL5 461 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 RAET1GQ6H3X3 334 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 PIM3Q86V86 326 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 NRROSQ86YC3 692 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 SLITRK4Q8IW52 837 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 PGBD5Q8N414 524 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 LZTR1Q8N653 840 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 HSPH1Q92598 858 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 EXTL1Q92935 676 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 ZNF599Q96NL3 588 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 NUDCD1Q96RS6 583 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 HSD3B7Q9H2F3 369 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 HAUS4Q9H6D7 363 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 ZWILCHQ9H900 591 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 AKAP7Q9P0M2 348 aaPredicted RBP10.34□□□□□ -0.75
CLRN3-201ENST00000368671 PCDHB11Q9Y5F2 797 aa10.34□□□□□ -0.75
CLRN3-201ENST00000368671 HEMK1Q9Y5R4 338 aaPredicted RBP10.34□□□□□ -0.75
CLRN3-201ENST00000368671 A0A1W2PQ67 120 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 HTRA2O43464 458 aaPredicted RBP10.33□□□□□ -0.76
CLRN3-201ENST00000368671 B4GAT1O43505 415 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 SOCS5O75159 536 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 ECEL1O95672 775 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 CPNE6O95741 557 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 FTLP02792 175 aaPredicted RBP10.33□□□□□ -0.76
CLRN3-201ENST00000368671 FUCA1P04066 466 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 FGF1P05230 155 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 CEACAM5P06731 702 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 CCL4P13236 92 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 CTPS1P17812 591 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 CR2P20023 1033 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 LHCGRP22888 699 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 HSPA9P38646 679 aaKnown RBP10.33□□□□□ -0.76
CLRN3-201ENST00000368671 ARL4AP40617 200 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 ETV3P41162 512 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 POLD2P49005 469 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 HCAR3P49019 387 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 ZNF135P52742 658 aaPredicted RBP10.33□□□□□ -0.76
CLRN3-201ENST00000368671 CDK3Q00526 305 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 NFKB2Q00653 900 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 TRAF2Q12933 501 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 DOK6Q6PKX4 331 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 SLC30A9Q6PML9 568 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 TMCO3Q6UWJ1 677 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 CLEC17AQ6ZS10 378 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 ZNF571Q7Z3V5 609 aaPredicted RBP10.33□□□□□ -0.76
CLRN3-201ENST00000368671 HSD11B1LQ7Z5J1 315 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 PSTKQ8IV42 348 aaKnown RBP10.33□□□□□ -0.76
CLRN3-201ENST00000368671 BBS5Q8N3I7 341 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 ZSCAN1Q8NBB4 408 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 RCBTB1Q8NDN9 531 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 GPBAR1Q8TDU6 330 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 FNIP1Q8TF40 1166 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 PATE1Q8WXA2 126 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 JPH3Q8WXH2 748 aaPredicted RBP10.33□□□□□ -0.76
CLRN3-201ENST00000368671 DTD2Q96FN9 168 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 NUDT22Q9BRQ3 303 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 TEX101Q9BY14 249 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 FRMD8Q9BZ67 464 aaPredicted RBP10.33□□□□□ -0.76
CLRN3-201ENST00000368671 TRIM4Q9C037 500 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 ZMYND15Q9H091 742 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 CLMPQ9H6B4 373 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms