RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 NRF1Q16656 503 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 PRR23BQ6ZRT6 265 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 NECAB2Q7Z6G3 386 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 DSELQ8IZU8 1212 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 STYXQ8WUJ0 223 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 TADA1Q96BN2 335 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 RNFT2Q96EX2 444 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 SEPT5Q99719 369 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 TRPV5Q9NQA5 729 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 TDRKHQ9Y2W6 561 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 TCAF1Q9Y4C2 921 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 TIMM13Q9Y5L4 95 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 OR6C75A6NL08 312 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 PSMD11O00231 422 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 CLDN5O00501 218 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 NDUFB5O43674 189 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 LYNP07948 512 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 OR1E1P30953 314 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 GRM3Q14832 879 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 ATP6AP1LQ52LC2 224 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 CCDC36Q8IYA8 594 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 LEMD2Q8NC56 503 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 DQX1Q8TE96 717 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 SLC7A6OSQ96CW6 309 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 NUAK2Q9H093 628 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 PNPLA3Q9NST1 481 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 CCDC167Q9P0B6 97 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 LEF1Q9UJU2 399 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 FOXO6A8MYZ6 492 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 DNAJA2O60884 412 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 RFPL1O75677 317 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 UMPSP11172 480 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 ITGAXP20702 1163 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 HUNKP57058 714 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 TUSC3Q13454 348 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 PHF21BQ96EK2 531 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 DCUN1D1Q96GG9 259 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 NPY6RQ99463 290 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 CCDC106Q9BWC9 280 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 DPEP3Q9H4B8 488 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 TRMT13Q9NUP7 481 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 SLC7A4O43246 635 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 TRMUO75648 421 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 ALDH1A2O94788 518 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 IPO13O94829 963 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 CELF2O95319 508 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 ALDH1A1P00352 501 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 ATP12AP54707 1039 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 CACNB2Q08289 660 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 SMU1Q2TAY7 513 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 CERCAMQ5T4B2 595 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 FSTL4Q6MZW2 842 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 EIF3MQ7L2H7 374 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 VPS37AQ8NEZ2 397 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 HTRA1Q92743 480 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 MRPL9Q9BYD2 267 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 UNC93B1Q9H1C4 597 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 MID1IP1Q9NPA3 183 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.37□□□□□ -1.556e-9■■■□□ 16.6
CDC42BPA-204ENST00000366767 ECM29Q5VYK3 1845 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 KRT87PA6NCN2 255 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 CCDC154A6NI56 674 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 CXorf49A8MYA2 514 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 CDC40O60508 579 aaKnown RBP eCLIP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 FGFR3P22607 806 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 GSSP48637 474 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 SRP54P61011 504 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 SPATS1Q496A3 300 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 PYDC2Q56P42 97 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 RNF219Q5W0B1 726 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 ABRAXAS1Q6UWZ7 409 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 BEND5Q7L4P6 421 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 C8orf59Q8N0T1 100 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 ADAM32Q8TC27 787 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 PROX1Q92786 737 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 RCN3Q96D15 328 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 MNTQ99583 582 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 FTHL17Q9BXU8 183 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 EMILIN2Q9BXX0 1053 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 EPB41L1Q9H4G0 881 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 OXSMQ9NWU1 459 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 RGS14O43566 566 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 CCNT2O60583 730 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 LYPLA1O75608 230 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 TFEBP19484 476 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 RAB15P59190 212 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 COPZ1P61923 177 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 EFEMP1Q12805 493 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 MZT2AQ6P582 158 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 CMC1Q7Z7K0 106 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 TMEM192Q8IY95 271 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 EID3Q8N140 333 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 STARD8Q92502 1023 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 PEBP4Q96S96 227 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 GATA5Q9BWX5 397 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 CLK4Q9HAZ1 481 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 PIH1D1Q9NWS0 290 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 POMPQ9Y244 141 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 TRAF6Q9Y4K3 522 aa5.37□□□□□ -1.55
CDC42BPA-204ENST00000366767 HES2Q9Y543 173 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms