RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 EPHA3P29320 983 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 PTPRNQ16849 979 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 CPTPQ5TA50 214 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 ADNP2Q6IQ32 1131 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 CCDC54Q8NEL0 328 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 AKAP1Q92667 903 aaKnown RBP eCLIP16.74■□□□□ 0.272e-7■□□□□ 10.2
NID1-202ENST00000366595 FCRL4Q96PJ5 515 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 TMEM27Q9HBJ8 222 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 ABCB9Q9NP78 766 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 OR12D3Q9UGF7 316 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 IKZF2Q9UKS7 526 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 XKRYO14609 159 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 GSC2O15499 205 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 SHBGP04278 402 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 SNAPC1Q16533 368 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 BBS12Q6ZW61 710 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 CHSY3Q70JA7 882 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 CYP4X1Q8N118 509 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 RAB2BQ8WUD1 216 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 TSEN15Q8WW01 171 aaKnown RBP16.74■□□□□ 0.27
NID1-202ENST00000366595 EHD4Q9H223 541 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 MTRRQ9UBK8 725 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 RIIAD1A6NNX1 92 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 E5RJQ4 531 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 CAP2P40123 477 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 MTHFRP42898 656 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 TUBA1BP68363 451 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 ECT2LQ008S8 904 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 TUBA1AQ71U36 451 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 EXO5Q9H790 373 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 TRAF6Q9Y4K3 522 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 ALOX15BO15296 676 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 MAP4K3Q8IVH8 894 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 CLP1Q92989 425 aaKnown RBP16.74■□□□□ 0.27
NID1-202ENST00000366595 RNF157Q96PX1 679 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 TMEM165Q9HC07 324 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 MYOZ2Q9NPC6 264 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 SNX15Q9NRS6 342 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 SOHLH2Q9NX45 425 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 PDP1Q9P0J1 537 aaPredicted RBP16.74■□□□□ 0.27
NID1-202ENST00000366595 FABP3P05413 133 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 CD86P42081 329 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 DNASE1L1P49184 302 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 RAPSNQ13702 412 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 PAN2Q504Q3 1202 aaKnown RBP16.73■□□□□ 0.27
NID1-202ENST00000366595 CCNYL2Q5T2Q4 361 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 DUPD1Q68J44 220 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 CNTD1Q8N815 330 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 GSTCDQ8NEC7 633 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 OR5T3Q8NGG3 340 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 KAT8Q9H7Z6 458 aaKnown RBP16.73■□□□□ 0.27
NID1-202ENST00000366595 DNAJC28Q9NX36 388 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 MARCH2Q9P0N8 246 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 A0A0J9YYE9 177 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 UROSP10746 265 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 ATXN7L2Q5T6C5 722 aaPredicted RBP16.73■□□□□ 0.27
NID1-202ENST00000366595 GLYATQ6IB77 296 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 ZNF433Q8N7K0 673 aaPredicted RBP16.73■□□□□ 0.27
NID1-202ENST00000366595 ZNF639Q9UID6 485 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 ABCG2Q9UNQ0 655 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 PPEF2O14830 753 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 ADAMDEC1O15204 470 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 SCELO95171 688 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 BPGMP07738 259 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 LACTB2Q53H82 288 aaPredicted RBP16.73■□□□□ 0.27
NID1-202ENST00000366595 ZCCHC12Q6PEW1 402 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 ZNF730Q6ZMV8 503 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 TRABD2AQ86V40 505 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 PGAM4Q8N0Y7 254 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 CCDC107Q8WV48 283 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 NODALQ96S42 347 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 TPK1Q9H3S4 243 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 PLCL2Q9UPR0 1127 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 C1QTNF3-AMACRE9PGA6 284 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 F8VP50 259 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 TIPRLO75663 272 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 CCNB1P14635 433 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 IGFALSP35858 605 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 RPS9P46781 194 aaKnown RBP16.73■□□□□ 0.27
NID1-202ENST00000366595 RARRES1P49788 294 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 RBFAQ8N0V3 343 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 DEFB129Q9H1M3 183 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 GPN3Q9UHW5 284 aaPredicted RBP16.73■□□□□ 0.27
NID1-202ENST00000366595 FBXO5Q9UKT4 447 aa16.73■□□□□ 0.27
NID1-202ENST00000366595 MID1O15344 667 aa16.72■□□□□ 0.27
NID1-202ENST00000366595 FGF1P05230 155 aa16.72■□□□□ 0.27
NID1-202ENST00000366595 LPOP22079 712 aaPredicted RBP16.72■□□□□ 0.27
NID1-202ENST00000366595 CEBPGP53567 150 aa16.72■□□□□ 0.27
NID1-202ENST00000366595 PPP3R1P63098 170 aa16.72■□□□□ 0.27
NID1-202ENST00000366595 ADAM8P78325 824 aa16.72■□□□□ 0.27
NID1-202ENST00000366595 KLF10Q13118 480 aa16.72■□□□□ 0.27
NID1-202ENST00000366595 C15orf40Q8WUR7 153 aa16.72■□□□□ 0.27
NID1-202ENST00000366595 PDCD2LQ9BRP1 358 aa16.72■□□□□ 0.27
NID1-202ENST00000366595 ZDHHC6Q9H6R6 413 aa16.72■□□□□ 0.27
NID1-202ENST00000366595 INTS10Q9NVR2 710 aaKnown RBP16.72■□□□□ 0.27
NID1-202ENST00000366595 EGFL7Q9UHF1 273 aa16.72■□□□□ 0.27
NID1-202ENST00000366595 SLC27A6Q9Y2P4 619 aa16.72■□□□□ 0.27
NID1-202ENST00000366595 AXIN1O15169 862 aa16.72■□□□□ 0.27
NID1-202ENST00000366595 SLC6A4P31645 630 aa16.72■□□□□ 0.27
NID1-202ENST00000366595 ATP5C1P36542 298 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms