RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 CACNB4O00305 520 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 THAP12O43422 761 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 KATNA1O75449 491 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 MAP3K6O95382 1288 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 HOXC4P09017 264 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 PRCPP42785 496 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 POLD2P49005 469 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 SULT1E1P49888 294 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 COPB1P53618 953 aaKnown RBP8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 RNASE9P60153 205 aaKnown RBP8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 CTBSQ01459 385 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 SLC6A3Q01959 620 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 GCNT1Q02742 428 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 UGP2Q16851 508 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 PTPN20Q4JDL3 420 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 MANEALQ5VSG8 457 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 JMJD6Q6NYC1 403 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 GJB7Q6PEY0 223 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 CEACAM20Q6UY09 585 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 C11orf57Q6ZUT1 292 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 SLC26A9Q7LBE3 791 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 TP53INP2Q8IXH6 220 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 C1orf131Q8NDD1 294 aaKnown RBP8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 KIAA1524Q8TCG1 905 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 INTS4Q96HW7 963 aaKnown RBP8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 GTPBP4Q9BZE4 634 aaKnown RBP8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 INTS2Q9H0H0 1204 aaKnown RBP8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 CARS2Q9HA77 564 aaKnown RBP8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 ARMCX3Q9UH62 379 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 DNAI1Q9UI46 699 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 MOSPD1Q9UJG1 213 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 SLC5A6Q9Y289 635 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 MFHAS1Q9Y4C4 1052 aa8.48□□□□□ -1.05
HMGB1P39-201ENST00000366304 PIPSLA2A3N6 862 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 A8MX80 341 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 PMM2O15305 246 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 TEX33O43247 280 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 MYL1P05976 194 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 GNA15P30679 374 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 FLT3P36888 993 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 STAT1P42224 750 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 GNPDA1P46926 289 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 NDUFA8P51970 172 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 PGDP52209 483 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 RPS18P62269 152 aaKnown RBP8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 DNM1Q05193 864 aaKnown RBP8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 DEUP1Q05D60 604 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 MTA1Q13330 715 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 LAMB3Q13751 1172 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 MAP7Q14244 749 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 POLD3Q15054 466 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 CYTH1Q15438 398 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 PAPD7Q5XG87 772 aaKnown RBP8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 LIPIQ6XZB0 460 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 FAM131BQ86XD5 332 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 MCEMP1Q8IX19 187 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 ESX1Q8N693 406 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 RBMXL3Q8N7X1 1067 aaKnown RBP8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 ZNF397Q8NF99 534 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 ATL2Q8NHH9 583 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 PGAP3Q96FM1 320 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 GDAP1L1Q96MZ0 367 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 KCTD15Q96SI1 283 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 FRMD8Q9BZ67 464 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 TWSG1Q9GZX9 223 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 TRIT1Q9H3H1 467 aaKnown RBP8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 PLCB1Q9NQ66 1216 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 ASF1BQ9NVP2 202 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 RRN3Q9NYV6 651 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 RCOR1Q9UKL0 485 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 SUFUQ9UMX1 484 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 PCYT1BQ9Y5K3 369 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 DOCK4Q8N1I0 1966 aa8.47□□□□□ -1.05
HMGB1P39-201ENST00000366304 SPG11Q96JI7 2443 aa8.46□□□□□ -1.05
HMGB1P39-201ENST00000366304 PCNX1Q96RV3 2341 aa8.46□□□□□ -1.05
HMGB1P39-201ENST00000366304 CXorf51AA0A1B0GTR3 108 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 POLR1CO15160 346 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 HNRNPRO43390 633 aaKnown RBP8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 BUB1O43683 1085 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 KDELR3O43731 214 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 CREG1O75629 220 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 HNRNPH3P31942 346 aaKnown RBP8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 ADCY8P40145 1251 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 RGRP47804 291 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 CCL11P51671 97 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 ELP6Q0PNE2 266 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 IL10RAQ13651 578 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 PKP1Q13835 747 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 C2CD6Q53TS8 623 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 SLC6A19Q695T7 634 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 MRPL14Q6P1L8 145 aaKnown RBP8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 PNCKQ6P2M8 343 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 WDR74Q6RFH5 385 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 C6orf15Q6UXA7 325 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 PHLDB2Q86SQ0 1253 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 CAMK1DQ8IU85 385 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 CCDC116Q8IYX3 515 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 SLC37A2Q8TED4 501 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 CT55Q8WUE5 264 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms