RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 KIF9Q9HAQ2 790 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 SLC6A13Q9NSD5 602 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 C9orf78Q9NZ63 289 aaPredicted RBP4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 INTS6Q9UL03 887 aaKnown RBP4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 CGNL1Q0VF96 1302 aa4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 KIF26BQ2KJY2 2108 aa4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 TIPRLO75663 272 aa4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 EIF3JO75822 258 aaKnown RBP4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 ITGA2P17301 1181 aa4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 CPOXP36551 454 aa4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 TMPOP42166 694 aaKnown RBP4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 HNRNPH2P55795 449 aaKnown RBP4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 DUS1LQ6P1R4 473 aaKnown RBP4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 KRBA2Q6ZNG9 492 aa4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 SMIM29Q86T20 159 aa4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 KCNG4Q8TDN1 519 aa4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 ABTB1Q969K4 478 aaPredicted RBP4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 SLC41A2Q96JW4 573 aa4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 FAM110AQ9BQ89 295 aa4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 EBF2Q9HAK2 575 aa4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 SLC13A4Q9UKG4 626 aa4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 RALYQ9UKM9 306 aaKnown RBP4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 PADI1Q9ULC6 663 aa4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 TTC7AQ9ULT0 858 aaPredicted RBP4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 ERVK-11Q9UQG0 969 aa4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 CAPN7Q9Y6W3 813 aa4.48□□□□□ -1.69
RNU4-28P-201ENST00000364739 LRRC53A6NM62 1247 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 USP17L23D6RBM5 183 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 TAF4O00268 1085 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 TGFB1I1O43294 461 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 CDH1P12830 882 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 CORO1AP31146 461 aaKnown RBP4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 ICAM3P32942 547 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 SEC61BP60468 96 aaKnown RBP4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 ISL1P61371 349 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 RBBP5Q15291 538 aaKnown RBP4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 GSTA3Q16772 222 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 CCDC96Q2M329 555 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 STPG1Q5TH74 334 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 IRAK1BP1Q5VVH5 260 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 ACAD10Q6JQN1 1059 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 METTL2BQ6P1Q9 378 aaKnown RBP4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 GFRALQ6UXV0 394 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 DSG4Q86SJ6 1040 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 TMEM219Q86XT9 240 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 WDR63Q8IWG1 891 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 EXOC8Q8IYI6 725 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 NFKBIDQ8NI38 313 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 GRAMD2BQ96HH9 432 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 METTL2AQ96IZ6 378 aaKnown RBP4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 MTERF1Q99551 399 aaKnown RBP4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 EPYCQ99645 322 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 C1QTNF5Q9BXJ0 243 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 PDP2Q9P2J9 529 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 GJD2Q9UKL4 321 aa4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 AAR2Q9Y312 384 aaKnown RBP4.47□□□□□ -1.69
RNU4-28P-201ENST00000364739 A0A0B4J293 547 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 CCDC196A0A1B0GTZ2 297 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 VCYO14598 125 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 LINC01565O15544 149 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 PLGP00747 810 aaPredicted RBP4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 UBL4AP11441 157 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 MYOD1P15172 320 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 S1PR1P21453 382 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 EPHA8P29322 1005 aaPredicted RBP4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 CDAP32320 146 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 GABRB2P47870 512 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 PIP4K2AP48426 406 aaPredicted RBP4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 CLCNKAP51800 687 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 ECT2LQ008S8 904 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 PDE1BQ01064 536 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 DRAP1Q14919 205 aaPredicted RBP4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 KCNT1Q5JUK3 1230 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 GFI1BQ5VTD9 330 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 GGNBP1Q5YKI7 109 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 ZNF280DQ6N043 979 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 DSTYKQ6XUX3 929 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 FOXL2NBQ6ZUU3 175 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 IL17RCQ8NAC3 791 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 OR13A1Q8NGR1 328 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 LNX1Q8TBB1 728 aaPredicted RBP4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 GTF3C6Q969F1 213 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 RHBDF1Q96CC6 855 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 ORAI1Q96D31 301 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 PPP1R13BQ96KQ4 1090 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 NR1H4Q96RI1 486 aaPredicted RBP4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 SEBOXQ9HB31 216 aaPredicted RBP4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 PCDH9Q9HC56 1237 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 UTYO14607 1347 aa4.46□□□□□ -1.7
RNU4-28P-201ENST00000364739 SMCHD1A6NHR9 2005 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 FAM237AA0A1B0GTK4 181 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 EGFP01133 1207 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 CRYAAP02489 173 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 STXBP5Q5T5C0 1151 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 PLEKHA7Q6IQ23 1121 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 KCTD18Q6PI47 426 aaPredicted RBP4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 GDPD4Q6W3E5 623 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 PQLC2Q6ZP29 291 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 R3HCC1LQ7Z5L2 792 aaKnown RBP4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 ARMC8Q8IUR7 673 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms