RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 HINT3Q9NQE9 182 aaKnown RBP3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 SIRT3Q9NTG7 399 aaPredicted RBP3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 MTMR10Q9NXD2 777 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 TUBA8Q9NY65 449 aaPredicted RBP3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 PSD3Q9NYI0 1048 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 HEY2Q9UBP5 337 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 FBXW11Q9UKB1 542 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 MAGED1Q9Y5V3 778 aaPredicted RBP3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 A0A1W2PRQ8 180 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 C1orf226A1L170 272 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 LRRC72A6NJI9 287 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 VCYO14598 125 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 OGG1O15527 345 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 LDB2O43679 373 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 ZC3H11AO75152 810 aaKnown RBP eCLIP3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 NDUFB8O95169 186 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 CYP19A1P11511 503 aaPredicted RBP3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 ARSBP15848 533 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 TRIM21P19474 475 aaKnown RBP3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 ANXA7P20073 488 aaKnown RBP3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 PRCPP42785 496 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 LMAN1P49257 510 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 STAT2P52630 851 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 AIMP1Q12904 312 aaKnown RBP3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 ZNF284Q2VY69 593 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 MMEL1Q495T6 779 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 WASHC2DQ5SRD0 308 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 DCAF12L2Q5VW00 463 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 MORN5Q5VZ52 161 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 NUGGCQ68CJ6 796 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 ADALQ6DHV7 355 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 METTL2BQ6P1Q9 378 aaKnown RBP3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 DENND5BQ6ZUT9 1274 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 MON1BQ7L1V2 547 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 TRAPPC11Q7Z392 1133 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 ANKRD23Q86SG2 305 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 EPHX4Q8IUS5 362 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 SPATA6LQ8N4H0 392 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 MINDY1Q8N5J2 469 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 ARFGAP1Q8N6T3 406 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 POMGNT2Q8NAT1 580 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 ARRDC2Q8TBH0 407 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 ERGIC1Q969X5 290 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 TMCO6Q96DC7 493 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 METTL2AQ96IZ6 378 aaKnown RBP3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 CNDP2Q96KP4 475 aaKnown RBP3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 ABHD1Q96SE0 405 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 SH3GL2Q99962 352 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 PCGF1Q9BSM1 259 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 KIFC3Q9BVG8 833 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 MRIQ9BWK5 157 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 APOL6Q9BWW8 343 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 KLHL4Q9C0H6 718 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 ISCUQ9H1K1 167 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 OR10A4Q9H209 315 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 KCNN2Q9H2S1 579 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 NDST4Q9H3R1 872 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 MAGIXQ9H6Y5 334 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 SLC28A3Q9HAS3 691 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 CLK4Q9HAZ1 481 aaKnown RBP3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 ZCCHC17Q9NP64 241 aaKnown RBP3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 GPR108Q9NPR9 543 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 NRIP3Q9NQ35 241 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 PAG1Q9NWQ8 432 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 ARHGEF38Q9NXL2 777 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 COPG2Q9UBF2 871 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 UBA2Q9UBT2 640 aaPredicted RBP3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 R3HDM2Q9Y2K5 976 aaKnown RBP3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 SRPRBQ9Y5M8 271 aaKnown RBP3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 CLIC4Q9Y696 253 aa3.8□□□□□ -1.8
RNU6-28P-201ENST00000362378 ARHGEF17Q96PE2 2063 aaPredicted RBP3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 LOC102723996A0A087X1L8 192 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 TMEM272A0A1B0GTI8 110 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 A0A1B0GVM2 712 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 MS4A18H0YCH9 400 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 ATP2A1O14983 1001 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 GPC4O75487 556 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 SOX30O94993 753 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 FGBP02675 491 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 CYC1P08574 325 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 UBA1P22314 1058 aaKnown RBP3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 THPOP40225 353 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 SUOXP51687 545 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 GPR143P51810 404 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 P2RX3P56373 397 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 CXCL9Q07325 125 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 SRSF4Q08170 494 aaKnown RBP3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 GRIK2Q13002 908 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 PRPF4BQ13523 1007 aaKnown RBP3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 GRAPQ13588 217 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 KCNC3Q14003 757 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 PSMD6Q15008 389 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 SPECC1Q5M775 1068 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 MANEAQ5SRI9 462 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 ERMARDQ5T6L9 678 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 ARMC3Q5W041 872 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 GGNBP1Q5YKI7 109 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 SIGIRRQ6IA17 410 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 ZNF367Q7RTV3 350 aa3.79□□□□□ -1.8
RNU6-28P-201ENST00000362378 CACNA2D4Q7Z3S7 1137 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms