RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 ATMINO43313 823 aaPredicted RBP21.08■□□□□ 0.97
CD47-202ENST00000361309 HTRA2O43464 458 aaPredicted RBP21.08■□□□□ 0.97
CD47-202ENST00000361309 HEXIM1O94992 359 aaKnown RBP21.08■□□□□ 0.97
CD47-202ENST00000361309 GOLGA6DP0CG33 693 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 ETV3P41162 512 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 POLD2P49005 469 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 CTBSQ01459 385 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 UBXN1Q04323 297 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 TMCO4Q5TGY1 634 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 HSD11B1LQ7Z5J1 315 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 NAGSQ8N159 534 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 SPOCK2Q92563 424 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 DTD2Q96FN9 168 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 PARVAQ9NVD7 372 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 KCTD5Q9NXV2 234 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 GOLGA6AQ9NYA3 693 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 PCDHGA3Q9Y5H0 932 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 TMCO5BA8MYB1 307 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 PPM1DO15297 605 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 SOCS5O75159 536 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 CPP00450 1065 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 LHCGRP22888 699 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 MPSTP25325 297 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 ADCY8P40145 1251 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 TRA2AQ13595 282 aaKnown RBP eCLIP21.07■□□□□ 0.96
CD47-202ENST00000361309 ZNF235Q14590 738 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 COLEC12Q5KU26 742 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 RAET1GQ6H3X3 334 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 CYP4V2Q6ZWL3 525 aaPredicted RBP21.07■□□□□ 0.96
CD47-202ENST00000361309 CBARPQ8N350 705 aaPredicted RBP21.07■□□□□ 0.96
CD47-202ENST00000361309 IL22RA1Q8N6P7 574 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 OR4D9Q8NGE8 314 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 ART4Q93070 314 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 ZNF599Q96NL3 588 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 CHMP5Q9NZZ3 219 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 CWC15Q9P013 229 aaKnown RBP21.07■□□□□ 0.96
CD47-202ENST00000361309 LIMA1Q9UHB6 759 aaKnown RBP21.07■□□□□ 0.96
CD47-202ENST00000361309 B3GALT1Q9Y5Z6 326 aa21.07■□□□□ 0.96
CD47-202ENST00000361309 A0A1W2PQ67 120 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 PRPSAP2O60256 369 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 RNF8O76064 485 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 LIFP15018 202 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 FERP16591 822 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 TNFAIP3P21580 790 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 MIPP30301 263 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 CSF2RBP32927 897 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 CSTF2P33240 577 aaKnown RBP eCLIP21.06■□□□□ 0.96
CD47-202ENST00000361309 UGT1A3P35503 534 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 TLE1Q04724 770 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 DPYSQ14117 519 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 PTPRRQ15256 657 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 PLEKHA7Q6IQ23 1121 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 BORAQ6PGQ7 559 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 Q6ZVL8 140 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 PGBD5Q8N414 524 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 AGBL5Q8NDL9 886 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 ANKRD20A12PQ8NF67 263 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 ERGIC2Q96RQ1 377 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 TRIM7Q9C029 511 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 ADNPQ9H2P0 1102 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 NOD2Q9HC29 1040 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 TMEM9Q9P0T7 183 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 PHTF1Q9UMS5 762 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 SLC17A4Q9Y2C5 497 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 PLEKHM1Q9Y4G2 1056 aa21.06■□□□□ 0.96
CD47-202ENST00000361309 IGHV1OR21-1A0A087WYE8 117 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 NPIPB15A6NHN6 443 aaPredicted RBP21.05■□□□□ 0.96
CD47-202ENST00000361309 IVLP07476 585 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 CCDC172P0C7W6 258 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 THRAP10827 490 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 CYP2A6P11509 494 aaPredicted RBP21.05■□□□□ 0.96
CD47-202ENST00000361309 CR2P20023 1033 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 NFKBIAP25963 317 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 HCAR3P49019 387 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 TRAF2Q12933 501 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 PEX6Q13608 980 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 DOK6Q6PKX4 331 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 IRF2BP2Q7Z5L9 587 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 PTRH1Q86Y79 214 aaKnown RBP21.05■□□□□ 0.96
CD47-202ENST00000361309 LZTR1Q8N653 840 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 CCDC112Q8NEF3 446 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 NUDCD1Q96RS6 583 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 SYT11Q9BT88 431 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 CDH19Q9H159 772 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 OCIAD1Q9NX40 245 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 SLC39A1Q9NY26 324 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 KCNK4Q9NYG8 393 aa21.05■□□□□ 0.96
CD47-202ENST00000361309 TMEM191CA6NGB0 347 aa21.04■□□□□ 0.96
CD47-202ENST00000361309 PSMD11O00231 422 aa21.04■□□□□ 0.96
CD47-202ENST00000361309 PEX11BO96011 259 aa21.04■□□□□ 0.96
CD47-202ENST00000361309 TEAD1P28347 426 aa21.04■□□□□ 0.96
CD47-202ENST00000361309 HSPA9P38646 679 aaKnown RBP21.04■□□□□ 0.96
CD47-202ENST00000361309 ACTR1BP42025 376 aa21.04■□□□□ 0.96
CD47-202ENST00000361309 ACTR1AP61163 376 aa21.04■□□□□ 0.96
CD47-202ENST00000361309 SRSF1Q07955 248 aaKnown RBP eCLIP21.04■□□□□ 0.96
CD47-202ENST00000361309 SQSTM1Q13501 440 aa21.04■□□□□ 0.96
CD47-202ENST00000361309 TSPAN33Q86UF1 283 aa21.04■□□□□ 0.96
CD47-202ENST00000361309 PSTKQ8IV42 348 aaKnown RBP21.04■□□□□ 0.96
CD47-202ENST00000361309 CACNA2D3Q8IZS8 1091 aa21.04■□□□□ 0.96
CD47-202ENST00000361309 DDA1Q9BW61 102 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 543.1 ms