RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 MRPS17Q9Y2R5 130 aaKnown RBP20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 ARHGEF28Q8N1W1 1705 aaKnown RBP20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 EFCAB10A6NFE3 127 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 MSANTD2Q6P1R3 559 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 OFCC1Q8IZS5 231 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 DCUN1D5Q9BTE7 237 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 LMAN2LQ9H0V9 348 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 MYO5BQ9ULV0 1848 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 CYP1A2P05177 515 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 MADCAM1Q13477 382 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 ARSIQ5FYB1 569 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 PRMT9Q6P2P2 845 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 CMC1Q7Z7K0 106 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 SPATA22Q8NHS9 363 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 NEK6Q9HC98 313 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 ALOX12P18054 663 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 IDSP22304 550 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 ST13P50502 369 aaKnown RBP20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 ST3GAL1Q11201 340 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 FIGNQ5HY92 759 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 CHSY3Q70JA7 882 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 SCAMP5Q8TAC9 235 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 TBX18O95935 607 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 GFOD2Q3B7J2 385 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 HPS6Q86YV9 775 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 BPIFB6Q8NFQ5 453 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 P2RY11Q96G91 374 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 MBOAT7Q96N66 472 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 SLC9A7Q96T83 725 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 APOL4Q9BPW4 351 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 RWDD3Q9Y3V2 267 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 LYPLA1O75608 230 aaPredicted RBP20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 TCEA3O75764 348 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 MT-CYBP00156 380 aaPredicted RBP20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 OR52E6Q96RD3 313 aa20.27■□□□□ 0.84
CDC42BPB-201ENST00000361246 MYBPHLA2RUH7 354 aa20.27■□□□□ 0.83
CDC42BPB-201ENST00000361246 LRRC72A6NJI9 287 aa20.27■□□□□ 0.83
CDC42BPB-201ENST00000361246 MFSD11O43934 449 aa20.27■□□□□ 0.83
CDC42BPB-201ENST00000361246 RBMXL2O75526 392 aaKnown RBP20.27■□□□□ 0.83
CDC42BPB-201ENST00000361246 ZNF549Q6P9A3 640 aa20.27■□□□□ 0.83
CDC42BPB-201ENST00000361246 MMAAQ8IVH4 418 aaKnown RBP20.27■□□□□ 0.83
CDC42BPB-201ENST00000361246 GHDCQ8N2G8 530 aa20.27■□□□□ 0.83
CDC42BPB-201ENST00000361246 STARD8Q92502 1023 aa20.27■□□□□ 0.83
CDC42BPB-201ENST00000361246 EGFL7Q9UHF1 273 aa20.27■□□□□ 0.83
CDC42BPB-201ENST00000361246 MAP4K5Q9Y4K4 846 aa20.27■□□□□ 0.83
CDC42BPB-201ENST00000361246 PTCH2Q9Y6C5 1203 aa20.27■□□□□ 0.83
CDC42BPB-201ENST00000361246 KCNE2Q9Y6J6 123 aa20.27■□□□□ 0.83
CDC42BPB-201ENST00000361246 A0A0G2JN53 185 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 CA12O43570 354 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 ARCN1P48444 511 aaKnown RBP20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 CLCN5P51795 746 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 NAE1Q13564 534 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 OR5M3Q8NGP4 307 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 CPXM1Q96SM3 734 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 DCLK1O15075 740 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 SIN3BO75182 1162 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 ALPPL2P10696 532 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 LSM3P62310 102 aaKnown RBP20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 XKR4Q5GH76 650 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 LCN9Q8WX39 176 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 ARHGAP9Q9BRR9 750 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 SLC35C2Q9NQQ7 365 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 COL1A2P08123 1366 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 LBX1P52954 281 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 ATXN1P54253 815 aaKnown RBP20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 UBXN11Q5T124 520 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 MYBL2P10244 700 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 SLC13A2Q13183 592 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 PLEKHG4Q58EX7 1191 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 TAPT1Q6NXT6 567 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 TMEM220Q6QAJ8 160 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 ZDHHC13Q8IUH4 622 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 PCDHA2Q9Y5H9 948 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 CCNDBP1O95273 360 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 PTPN9P43378 593 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 DLG2Q15700 870 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 FCGR1AP12314 374 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 ACLYP53396 1101 aa20.26■□□□□ 0.83
CDC42BPB-201ENST00000361246 RFXANKO14593 260 aa20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 GIMD1P0DJR0 217 aa20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 ARSHQ5FYA8 562 aa20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 CYB5D1Q6P9G0 228 aa20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 FAM71AQ8IYT1 594 aa20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 KCNN2Q9H2S1 579 aa20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 A0A0G2JLL6 359 aaPredicted RBP20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 CLDN11O75508 207 aa20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 MLYCDO95822 493 aa20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 MSX2P35548 267 aaPredicted RBP20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 NOMO3P69849 1222 aa20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 BEND5Q7L4P6 421 aa20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 PRRT2Q7Z6L0 340 aaPredicted RBP20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 CLEC4CQ8WTT0 213 aa20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 PHF10Q8WUB8 498 aaKnown RBP20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 DNAJC19Q96DA6 116 aa20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 C11orf84Q9BUA3 381 aaPredicted RBP20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 NCDNQ9UBB6 729 aa20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 U3KQV3 271 aa20.25■□□□□ 0.83
CDC42BPB-201ENST00000361246 CLOCKO15516 846 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms