RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 IRX4P78413 519 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 ARHGAP8P85298 464 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 BLMHQ13867 455 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 CES3Q6UWW8 571 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 PDZD4Q76G19 769 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 RASSF3Q86WH2 238 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 C10orf107Q8IVU9 208 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 TMEM86AQ8N2M4 240 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 HDAC11Q96DB2 347 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 TRMT2BQ96GJ1 504 aaKnown RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 PCED1BQ96HM7 432 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 SENP8Q96LD8 212 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 RBBP8Q99708 897 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 SYT17Q9BSW7 474 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 MED10Q9BTT4 135 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 BRD8Q9H0E9 1235 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 LRRC40Q9H9A6 602 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 STX18Q9P2W9 335 aaKnown RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 COPG2Q9UBF2 871 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 STOML1Q9UBI4 398 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 ADAM28Q9UKQ2 775 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 DNAJC16Q9Y2G8 782 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 Q9Y3F1 56 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 MYBPHLA2RUH7 354 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 EIF4E1BA6NMX2 242 aaKnown RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 ERI2A8K979 691 aaKnown RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 FAM47E-STBD1D6RA91 191 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 TBX10O75333 385 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 KRT36O76013 467 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 TM7SF2O76062 418 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 LUC7L3O95232 432 aaKnown RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 F7P08709 466 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 ACADSP16219 412 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 CD53P19397 219 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 CPOXP36551 454 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 LHX1P48742 406 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 HARS2P49590 506 aaKnown RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 CSRP3P50461 194 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 ALDH18A1P54886 795 aaKnown RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 PDE1BQ01064 536 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 NRG1Q02297 640 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 GALNT2Q10471 571 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 NAA25Q14CX7 972 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 RCN1Q15293 331 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 GPR158Q5T848 1215 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 BSPRYQ5W0U4 402 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 TWF2Q6IBS0 349 aaKnown RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 CLEC14AQ86T13 490 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 KLHDC8BQ8IXV7 354 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 ARHGAP24Q8N264 748 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 ZNF333Q96JL9 665 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 PGLYRP2Q96PD5 576 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 MLPHQ9BV36 600 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 COLEC11Q9BWP8 271 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 GBA3Q9H227 469 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 GSX1Q9H4S2 264 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 SNX15Q9NRS6 342 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 KLHL8Q9P2G9 620 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 CACNG4Q9UBN1 327 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 VANGL2Q9ULK5 521 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 F8W735 103 aaPredicted RBP7.38□□□□□ -1.23
CLCN3-202ENST00000360642 SPECC1L-ADORA2AF8WAN1 911 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 ZNF561-AS1K7EIQ3 104 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 MAN2B1O00754 1011 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 TERTO14746 1132 aaKnown RBP7.38□□□□□ -1.23
CLCN3-202ENST00000360642 CAPN9O14815 690 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 ULK1O75385 1050 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 TYK2P29597 1187 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 CDC25CP30307 473 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 CXCR3P49682 368 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 LIMK2P53671 638 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 TPI1P60174 286 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 FKBP1BP68106 108 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 BEX3Q00994 111 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 SLC34A1Q06495 639 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 C3orf36Q3SXR2 165 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 CCDC153Q494R4 210 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 SFRP5Q5T4F7 317 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 NET1Q7Z628 596 aaPredicted RBP7.38□□□□□ -1.23
CLCN3-202ENST00000360642 DCLK2Q8N568 766 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 CCDC140Q96MF4 163 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 SYT15Q9BQS2 421 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 LRFN3Q9BTN0 628 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 CSNK1G1Q9HCP0 422 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 SLC38A7Q9NVC3 462 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 MIOSQ9NXC5 875 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 RRN3Q9NYV6 651 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 MAGEB16A2A368 324 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 MTSS1O43312 755 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 NCAM1P13591 858 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 VHLP40337 213 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 GARSP41250 739 aaKnown RBP7.38□□□□□ -1.23
CLCN3-202ENST00000360642 CDK7P50613 346 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 CLCNKBP51801 687 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 ZNF135P52742 658 aaPredicted RBP7.38□□□□□ -1.23
CLCN3-202ENST00000360642 KDSRQ06136 332 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 ZBTB17Q13105 803 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 EIF4EBP2Q13542 120 aaPredicted RBP7.38□□□□□ -1.23
CLCN3-202ENST00000360642 GTF2H3Q13889 308 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms