RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 LAMP2P13473 410 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 HOXD9P28356 352 aaPredicted RBP13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 CHRNA4P43681 627 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 CSRP3P50461 194 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 IRX4P78413 519 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 SLC34A1Q06495 639 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 BST1Q10588 318 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 ZNF177Q13360 481 aaPredicted RBP13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 DYNC1I2Q13409 638 aaKnown RBP13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 SMAD1Q15797 465 aaKnown RBP13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 PARM1Q6UWI2 310 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 KIAA0408Q6ZU52 694 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 TMEM25Q86YD3 366 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 FAM217AQ8IXS0 508 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 SLC25A41Q8N5S1 370 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 CALML6Q8TD86 181 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 SUSD6Q92537 303 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 FGF14Q92915 247 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 DTNBP1Q96EV8 351 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 TMA16Q96EY4 203 aaKnown RBP13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 FEM1CQ96JP0 617 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 RPP25Q9BUL9 199 aaKnown RBP13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 RHBDL2Q9NX52 303 aa13.89□□□□□ -0.19
CSNK1E-201ENST00000359867 A0A096LPK6 155 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 GFRA2O00451 464 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 SNNO75324 88 aaPredicted RBP13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 UBTFL6P0CB48 400 aaPredicted RBP13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 HLA-DPA1P20036 260 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 ARNTP27540 789 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 ETFBP38117 255 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 OCRLQ01968 901 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 STX3Q13277 289 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 CNGA3Q16281 694 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 FASTKD1Q53R41 847 aaKnown RBP13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 PPM1JQ5JR12 505 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 TSTD2Q5T7W7 516 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 IL31Q6EBC2 164 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 GPR153Q6NV75 609 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 ZNF783Q6ZMS7 281 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 KDELC2Q7Z4H8 507 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 CLEC14AQ86T13 490 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 WFDC5Q8TCV5 224 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 BPIFB1Q8TDL5 484 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 SEMA3CQ99985 751 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 PLA2G2FQ9BZM2 168 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 ZFP14Q9HCL3 533 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 THAP1Q9NVV9 213 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 SEPT3Q9UH03 358 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 CLEC4EQ9ULY5 219 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 TBC1D30Q9Y2I9 924 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 A0A0D9SEW6 157 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 AHSGP02765 367 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 RHOCP08134 193 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 CES1P23141 567 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 OXCT1P55809 520 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 SFSWAPQ12872 951 aaKnown RBP13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 ILF2Q12905 390 aaKnown RBP13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 SEPT6Q14141 434 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 GRM2Q14416 872 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 C16orf46Q6P387 395 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 VITQ6UXI7 678 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 ZCCHC23Q6ZST2 131 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 CMC1Q7Z7K0 106 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 CARNMT1Q8N4J0 409 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 C2CD4AQ8NCU7 369 aaPredicted RBP13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 PEX13Q92968 403 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 MGME1Q9BQP7 344 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 TMEM216Q9P0N5 145 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 UBA2Q9UBT2 640 aaPredicted RBP13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 SLC2A6Q9UGQ3 507 aa13.88□□□□□ -0.19
CSNK1E-201ENST00000359867 CCDC78A2IDD5 438 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 MEI4A8MW99 385 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 GOLGA8TH3BQL2 631 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 HNRNPCL1O60812 293 aaKnown RBP13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 PRKCGP05129 697 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 FGF1P05230 155 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 C2P06681 752 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 IHHQ14623 411 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 GRM3Q14832 879 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 HSF5Q4G112 596 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 FSCBQ5H9T9 825 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 SIRPB2Q5JXA9 342 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 LY6G5CQ5SRR4 150 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 CPXM2Q8N436 756 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 HJURPQ8NCD3 748 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 OR7D4Q8NG98 312 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 ATXN7L3BQ96GX2 97 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 PSKH2Q96QS6 385 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 ACE2Q9BYF1 805 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 ATXN10Q9UBB4 475 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 MID2Q9UJV3 735 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 MROH6A6NGR9 719 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 NEDD8-MDP1E9PL57 170 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 APOA4P06727 396 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 SERPINF2P08697 491 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 ATXN1LP0C7T5 689 aaKnown RBP13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 COL6A2P12110 1019 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 ZNF24P17028 368 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 GRK2P25098 689 aa13.87□□□□□ -0.19
CSNK1E-201ENST00000359867 ALDH18A1P54886 795 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms